Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm23193-201ENSMUST00000102427 82 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm13033-201ENSMUST00000117591 1057 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm12808-201ENSMUST00000120597 404 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm26098-201ENSMUST00000157247 288 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 AC154296.3-201ENSMUST00000214427 712 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Snord15b-201ENSMUST00000083032 145 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Mir504-201ENSMUST00000093602 79 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm25821-201ENSMUST00000093657 133 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Gm37831-201ENSMUST00000191685 1787 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 AC190403.1-201ENSMUST00000224515 1325 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 AC155805.1-201ENSMUST00000222419 3808 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Fus-202ENSMUST00000079045 2623 ntBASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Gm3550W4VSN7 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Gm3550W4VSN7 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
Gm3550W4VSN7 Gm43188-201ENSMUST00000200180 2160 ntBASIC3.9□□□□□ -1.78
Gm3550W4VSN7 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Gm3550W4VSN7 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Gm3550W4VSN7 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Gm3550W4VSN7 Gm43888-201ENSMUST00000204405 2587 ntBASIC3.9□□□□□ -1.78
Gm3550W4VSN7 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Gm3550W4VSN7 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Gm3550W4VSN7 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm14756-201ENSMUST00000116395 240 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm15971-201ENSMUST00000119372 211 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm26347-201ENSMUST00000157526 131 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm3531-201ENSMUST00000162698 489 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm17046-201ENSMUST00000168078 850 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm8214-201ENSMUST00000172123 351 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm16378-201ENSMUST00000179168 342 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Mir6418-201ENSMUST00000185075 115 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm29596-201ENSMUST00000185710 385 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm18342-201ENSMUST00000186987 694 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm3145-201ENSMUST00000188584 220 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Igkv2-107-201ENSMUST00000196000 313 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm42720-201ENSMUST00000196813 300 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm42539-201ENSMUST00000197009 308 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm4714-201ENSMUST00000203395 279 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm3148-201ENSMUST00000203594 612 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm19936-201ENSMUST00000216414 838 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 AC131745.2-201ENSMUST00000225736 565 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 AC154484.2-201ENSMUST00000228359 818 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm10145-201ENSMUST00000077776 462 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 n-R5s27-201ENSMUST00000093699 119 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 AC131743.1-201ENSMUST00000222138 4024 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.9□□□□□ -1.79
Gm3550W4VSN7 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Gm3550W4VSN7 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Gm3550W4VSN7 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Gm3550W4VSN7 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Gm3550W4VSN7 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Gm3550W4VSN7 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Gm3550W4VSN7 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Gm3550W4VSN7 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms