Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm20074-201ENSMUST00000208144 484 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm18127-201ENSMUST00000208479 725 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm34272-201ENSMUST00000208886 253 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Mir99a-201ENSMUST00000083596 65 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.68
Trim3Q9R1R2 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Trim3Q9R1R2 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Trim3Q9R1R2 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm16463-201ENSMUST00000120527 721 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm15267-201ENSMUST00000120888 464 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm25106-201ENSMUST00000122672 134 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm24675-201ENSMUST00000158757 259 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm16456-201ENSMUST00000174431 920 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm22355-201ENSMUST00000175531 96 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm26731-201ENSMUST00000180683 543 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm27551-201ENSMUST00000184258 77 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm43968-201ENSMUST00000203388 389 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Snord15b-201ENSMUST00000083032 145 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Trim3Q9R1R2 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm15670-201ENSMUST00000117740 447 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm16254-201ENSMUST00000131528 730 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm23534-201ENSMUST00000157539 97 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm26490-201ENSMUST00000157879 140 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms