Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm26983-201ENSMUST00000182051 388 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm4557-201ENSMUST00000185826 907 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm4526-201ENSMUST00000186039 920 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm8708-201ENSMUST00000188500 906 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm28061-201ENSMUST00000189085 807 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm28769-201ENSMUST00000190176 615 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm43136-201ENSMUST00000200403 636 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm23796-201ENSMUST00000084011 160 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm3267-201ENSMUST00000118671 473 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm16106-201ENSMUST00000119187 294 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm12854-201ENSMUST00000128518 297 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm22859-201ENSMUST00000174978 122 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm4617-201ENSMUST00000178993 331 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm28967-201ENSMUST00000187351 281 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm29097-201ENSMUST00000190273 422 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm44694-201ENSMUST00000205317 1298 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm7665-201ENSMUST00000076710 297 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Lima1Q9ERG0 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm14175-201ENSMUST00000119835 241 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm27543-201ENSMUST00000183562 177 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm28097-201ENSMUST00000187333 366 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms