Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc9Q8VC31 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC131068.3-201ENSMUST00000228438 1456 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm42968-201ENSMUST00000198578 1372 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm11821-201ENSMUST00000117335 979 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm13866-201ENSMUST00000118901 968 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm13473-201ENSMUST00000119289 367 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm14067-201ENSMUST00000119340 314 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm12757-201ENSMUST00000119465 800 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm13532-201ENSMUST00000120373 240 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm15194-201ENSMUST00000120453 434 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm11349-201ENSMUST00000122209 1116 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm25966-201ENSMUST00000157169 117 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm23965-201ENSMUST00000157969 142 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Mir1946a-201ENSMUST00000158360 134 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm20689-201ENSMUST00000176033 279 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm16531-201ENSMUST00000180658 967 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Mir6374-201ENSMUST00000184003 107 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm27818-201ENSMUST00000184536 159 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm37235-201ENSMUST00000195171 59 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC126673.2-201ENSMUST00000221052 686 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.97□□□□□ -1.45
Ccdc9Q8VC31 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Ccdc9Q8VC31 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ccdc9Q8VC31 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Ccdc9Q8VC31 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.96□□□□□ -1.45
Ccdc9Q8VC31 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ccdc9Q8VC31 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ccdc9Q8VC31 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.96□□□□□ -1.45
Ccdc9Q8VC31 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm14975-201ENSMUST00000118741 664 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm7189-201ENSMUST00000119811 429 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm14695-201ENSMUST00000121721 282 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm14840-201ENSMUST00000122135 594 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm25669-201ENSMUST00000157699 112 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm24860-201ENSMUST00000158457 276 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm22530-201ENSMUST00000158820 118 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm27460-201ENSMUST00000184213 100 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm27679-201ENSMUST00000184612 84 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm37241-201ENSMUST00000191736 523 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm37609-201ENSMUST00000191778 678 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm18547-201ENSMUST00000192439 811 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm29745-201ENSMUST00000198005 687 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm19900-201ENSMUST00000207285 576 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm18306-201ENSMUST00000207338 569 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm19572-201ENSMUST00000214326 338 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm18242-201ENSMUST00000218455 542 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm18387-201ENSMUST00000220333 702 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms