Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm23274-201ENSMUST00000104056 130 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm22778-201ENSMUST00000104090 128 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm12683-201ENSMUST00000117528 415 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm12313-201ENSMUST00000121347 421 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm11389-201ENSMUST00000121407 430 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm3160-201ENSMUST00000128343 607 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm26310-201ENSMUST00000157766 117 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm25861-201ENSMUST00000158251 109 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm10784-201ENSMUST00000178715 238 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm29525-201ENSMUST00000189844 699 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm29523-201ENSMUST00000191415 699 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm37438-201ENSMUST00000192813 393 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm8719-201ENSMUST00000203602 534 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm44277-201ENSMUST00000205128 649 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm45382-201ENSMUST00000210607 151 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 AC153975.1-201ENSMUST00000220087 926 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm5457-201ENSMUST00000022260 333 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.04□□□□□ -1.44
Vps53Q8CCB4 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm43283-201ENSMUST00000199138 2548 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm11387-201ENSMUST00000120266 772 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm15057-201ENSMUST00000121516 534 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm5353-201ENSMUST00000139800 793 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm22111-201ENSMUST00000178010 79 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm23687-201ENSMUST00000178664 79 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm24566-201ENSMUST00000179286 79 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm23305-201ENSMUST00000179342 79 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm26389-201ENSMUST00000179819 79 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm22130-201ENSMUST00000179979 79 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm22393-201ENSMUST00000180153 79 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm25085-201ENSMUST00000180298 79 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Mir7222-201ENSMUST00000183740 75 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm34176-201ENSMUST00000192621 474 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm44074-201ENSMUST00000204562 337 ntBASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Vps53Q8CCB4 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Vps53Q8CCB4 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.02□□□□□ -1.44
Vps53Q8CCB4 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.02□□□□□ -1.44
Vps53Q8CCB4 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Vps53Q8CCB4 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms