Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm24117-201ENSMUST00000103973 133 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm14621-201ENSMUST00000117709 689 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm11366-201ENSMUST00000119279 429 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm14046-201ENSMUST00000119389 509 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm14651-201ENSMUST00000147192 442 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm26153-201ENSMUST00000157433 127 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm20462-201ENSMUST00000172623 408 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm20523-201ENSMUST00000174340 1124 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm28385-201ENSMUST00000185671 292 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm29492-201ENSMUST00000187124 457 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 AC118733.1-201ENSMUST00000217387 1217 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm24150-201ENSMUST00000082759 104 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm37766-201ENSMUST00000192244 2567 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm19131-202ENSMUST00000203464 3208 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm14415-201ENSMUST00000118260 1578 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm26376-201ENSMUST00000104784 110 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm9001-201ENSMUST00000121642 399 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm12854-201ENSMUST00000128518 297 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm22312-201ENSMUST00000158005 130 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm23760-201ENSMUST00000158350 116 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm2930-201ENSMUST00000170403 474 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm19203-201ENSMUST00000174049 939 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm6717-201ENSMUST00000185549 838 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm4410-201ENSMUST00000199349 686 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm18691-201ENSMUST00000203593 872 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm7665-201ENSMUST00000076710 297 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Gm43788-201ENSMUST00000201539 2417 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.16□□□□□ -1.26
Usp40Q8BWR4 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Snord70-201ENSMUST00000104157 87 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm14786-201ENSMUST00000117127 944 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm12110-201ENSMUST00000121601 579 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm8214-201ENSMUST00000172123 351 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm27528-201ENSMUST00000183544 205 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm37503-201ENSMUST00000192088 319 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm43919-201ENSMUST00000204303 364 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms