Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Mir147-201ENSMUST00000102354 79 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Mir879-201ENSMUST00000104703 76 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm16463-201ENSMUST00000120527 721 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm13484-201ENSMUST00000120738 412 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm25432-201ENSMUST00000158284 66 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm24675-201ENSMUST00000158757 259 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm28467-201ENSMUST00000190981 318 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm44376-201ENSMUST00000197570 128 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm6230-201ENSMUST00000208077 780 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm36501-201ENSMUST00000221857 745 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm7768-201ENSMUST00000222988 597 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.14□□□□□ -1.59
Ccdc40Q8BI79 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm22106-201ENSMUST00000122544 127 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm25150-201ENSMUST00000157121 60 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm4134-201ENSMUST00000173244 563 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm27036-201ENSMUST00000182465 980 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm28877-201ENSMUST00000191349 604 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm43925-201ENSMUST00000203498 206 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm32453-201ENSMUST00000204183 456 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm44972-201ENSMUST00000206419 406 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm45200-201ENSMUST00000207434 919 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm45359-201ENSMUST00000210635 427 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm18904-201ENSMUST00000218756 329 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Gm18409-202ENSMUST00000220105 529 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ccdc40Q8BI79 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm22370-201ENSMUST00000102422 83 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm23274-201ENSMUST00000104056 130 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms