Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Upf3bQ3ULL6 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.99□□□□□ -1.61
Upf3bQ3ULL6 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.99□□□□□ -1.61
Upf3bQ3ULL6 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3bQ3ULL6 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3bQ3ULL6 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3bQ3ULL6 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Upf3bQ3ULL6 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3bQ3ULL6 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3bQ3ULL6 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm14909-201ENSMUST00000117853 351 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm14876-201ENSMUST00000120795 327 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm25116-201ENSMUST00000157191 122 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm24751-201ENSMUST00000157844 102 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm26034-201ENSMUST00000158154 116 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm9499-201ENSMUST00000180888 964 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Mir7022-201ENSMUST00000183749 61 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm28186-201ENSMUST00000187447 679 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm44779-201ENSMUST00000206937 708 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm6065-201ENSMUST00000081336 492 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm6043-201ENSMUST00000099961 492 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.98□□□□□ -1.61
Upf3bQ3ULL6 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm5353-201ENSMUST00000139800 793 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Mir3090-201ENSMUST00000175597 87 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm26950-201ENSMUST00000182734 498 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm8604-201ENSMUST00000183150 965 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm37961-201ENSMUST00000192729 299 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm44277-201ENSMUST00000205128 649 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm18258-201ENSMUST00000210413 542 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3bQ3ULL6 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Upf3bQ3ULL6 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
Upf3bQ3ULL6 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Upf3bQ3ULL6 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Upf3bQ3ULL6 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm23594-201ENSMUST00000104307 134 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm23709-201ENSMUST00000104364 130 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm22194-201ENSMUST00000116869 95 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm12287-201ENSMUST00000119770 707 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms