Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm24239-201ENSMUST00000157791 255 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm8221-201ENSMUST00000178052 564 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm37355-201ENSMUST00000193345 606 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm37908-201ENSMUST00000195828 470 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm8911-201ENSMUST00000213986 652 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm23300-201ENSMUST00000082712 125 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.03□□□□□ -1.6
Upf3aQ3ULJ3 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm14876-201ENSMUST00000120795 327 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm22819-201ENSMUST00000157445 303 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm24507-201ENSMUST00000157683 134 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm25846-201ENSMUST00000158013 135 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm3077-201ENSMUST00000165903 627 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm27414-201ENSMUST00000185033 381 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm18482-201ENSMUST00000202405 760 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm44431-201ENSMUST00000203500 413 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm25140-201ENSMUST00000083254 140 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.02□□□□□ -1.61
Upf3aQ3ULJ3 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm22493-201ENSMUST00000104494 132 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms