Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 AL929417.1-201ENSMUST00000214901 124 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 AC109214.2-201ENSMUST00000220089 358 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm19134-201ENSMUST00000221203 487 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 AC157654.1-201ENSMUST00000224130 820 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col17a1Q07563 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col17a1Q07563 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm37342-201ENSMUST00000194588 4965 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Naip3-201ENSMUST00000118082 4208 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col17a1Q07563 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm12252-201ENSMUST00000119517 219 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm23743-201ENSMUST00000157389 274 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm28655-201ENSMUST00000191538 692 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm8790-201ENSMUST00000194108 322 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm43361-201ENSMUST00000196562 4690 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm43304-201ENSMUST00000196803 326 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm42454-201ENSMUST00000196805 1181 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 AC142113.2-201ENSMUST00000217425 748 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col17a1Q07563 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gnrh1-202ENSMUST00000223929 428 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col17a1Q07563 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col17a1Q07563 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col17a1Q07563 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col17a1Q07563 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col17a1Q07563 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm8674-201ENSMUST00000179367 3047 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col17a1Q07563 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col17a1Q07563 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm13460-201ENSMUST00000121274 353 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm14713-201ENSMUST00000122362 686 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC7.67□□□□□ -1.18
Col17a1Q07563 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm23554-201ENSMUST00000157818 110 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm26401-201ENSMUST00000158502 76 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm19086-201ENSMUST00000190772 665 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm37727-201ENSMUST00000191637 819 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm42830-201ENSMUST00000196642 313 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC7.67□□□□□ -1.18
Col17a1Q07563 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC7.67□□□□□ -1.18
Col17a1Q07563 CT030242.2-201ENSMUST00000221588 148 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 AC166830.1-201ENSMUST00000224201 533 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col17a1Q07563 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col17a1Q07563 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.67□□□□□ -1.18
Col17a1Q07563 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm42905-201ENSMUST00000196237 1611 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm13806-201ENSMUST00000117822 325 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm13506-201ENSMUST00000120391 1083 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm15379-201ENSMUST00000121224 648 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm14413-201ENSMUST00000122158 408 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm25102-201ENSMUST00000122479 112 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm25438-201ENSMUST00000158281 110 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm16456-201ENSMUST00000174431 920 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Mir7050-201ENSMUST00000184636 60 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm38268-201ENSMUST00000195813 193 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm43036-201ENSMUST00000200594 373 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm44816-201ENSMUST00000206666 477 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col17a1Q07563 CT030242.3-201ENSMUST00000221231 581 ntBASIC7.66□□□□□ -1.18
Col17a1Q07563 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms