Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm7312-201ENSMUST00000118798 469 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm14933-201ENSMUST00000118840 481 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm13438-201ENSMUST00000120100 573 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm13132-201ENSMUST00000121194 472 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm16259-201ENSMUST00000145241 553 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm25913-201ENSMUST00000157617 135 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm23318-201ENSMUST00000158000 108 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm26993-201ENSMUST00000182766 789 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm5372-201ENSMUST00000187540 409 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm20239-201ENSMUST00000196610 982 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm43015-201ENSMUST00000199087 565 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm24031-201ENSMUST00000083930 131 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.13□□□□□ -1.75
Nkx3-1P97436 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Nkx3-1P97436 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm13733-201ENSMUST00000117290 535 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm14909-201ENSMUST00000117853 351 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm14610-201ENSMUST00000118358 966 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm13787-201ENSMUST00000120422 168 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm13932-201ENSMUST00000120873 610 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm24251-201ENSMUST00000157324 114 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm24507-201ENSMUST00000157683 134 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm21850-201ENSMUST00000179792 359 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Mir6391-201ENSMUST00000184391 104 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm29138-201ENSMUST00000191444 348 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm4574-201ENSMUST00000207804 542 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm45608-201ENSMUST00000210948 389 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm272-201ENSMUST00000222073 919 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm23875-201ENSMUST00000083711 318 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx3-1P97436 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.12□□□□□ -1.75
Nkx3-1P97436 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm14706-201ENSMUST00000117744 255 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm11409-201ENSMUST00000118621 403 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm12041-201ENSMUST00000121606 602 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm22789-201ENSMUST00000157884 130 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms