Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Gm27805-201ENSMUST00000184513 79 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.27□□□□□ -1.57
NcanP55066 Gm4322-201ENSMUST00000191094 336 ntBASIC5.27□□□□□ -1.57
NcanP55066 Mir7118-201ENSMUST00000197760 61 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.27□□□□□ -1.57
NcanP55066 Gm7946-201ENSMUST00000203326 958 ntBASIC5.27□□□□□ -1.57
NcanP55066 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.27□□□□□ -1.57
NcanP55066 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.27□□□□□ -1.57
NcanP55066 Gm45727-201ENSMUST00000212886 572 ntBASIC5.27□□□□□ -1.57
NcanP55066 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.27□□□□□ -1.57
NcanP55066 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.27□□□□□ -1.57
NcanP55066 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NcanP55066 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NcanP55066 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
NcanP55066 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NcanP55066 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
NcanP55066 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.27□□□□□ -1.57
NcanP55066 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NcanP55066 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NcanP55066 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.26□□□□□ -1.57
NcanP55066 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.26□□□□□ -1.57
NcanP55066 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NcanP55066 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
NcanP55066 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.26□□□□□ -1.57
NcanP55066 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Gm14103-201ENSMUST00000119075 366 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm15012-201ENSMUST00000119176 106 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm11598-201ENSMUST00000119257 357 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm14369-201ENSMUST00000121355 285 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm22816-201ENSMUST00000157450 117 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm25386-201ENSMUST00000157814 288 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm23354-201ENSMUST00000158426 104 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.26□□□□□ -1.57
NcanP55066 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm16456-201ENSMUST00000174431 920 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NcanP55066 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.26□□□□□ -1.57
NcanP55066 Gm27688-201ENSMUST00000183634 91 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm27773-201ENSMUST00000184087 78 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm28304-201ENSMUST00000185977 312 ntBASIC5.26□□□□□ -1.57
NcanP55066 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.26□□□□□ -1.57
NcanP55066 Gm29256-201ENSMUST00000189094 312 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm28484-201ENSMUST00000190606 312 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm37495-201ENSMUST00000194590 264 ntBASIC5.26□□□□□ -1.57
NcanP55066 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.26□□□□□ -1.57
NcanP55066 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Gm45007-201ENSMUST00000206237 366 ntBASIC5.26□□□□□ -1.57
NcanP55066 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NcanP55066 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC5.26□□□□□ -1.57
NcanP55066 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.26□□□□□ -1.57
NcanP55066 Gm4036-201ENSMUST00000220842 626 ntBASIC5.26□□□□□ -1.57
NcanP55066 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.26□□□□□ -1.57
NcanP55066 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.26□□□□□ -1.57
NcanP55066 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.26□□□□□ -1.57
NcanP55066 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NcanP55066 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Gm37211-201ENSMUST00000193392 3433 ntBASIC5.26□□□□□ -1.57
NcanP55066 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NcanP55066 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NcanP55066 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NcanP55066 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.25□□□□□ -1.57
NcanP55066 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NcanP55066 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.25□□□□□ -1.57
NcanP55066 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.25□□□□□ -1.57
NcanP55066 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms