Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc2P43407 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc2P43407 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.98□□□□□ -1.61
Sdc2P43407 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm15838-201ENSMUST00000161575 180 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Sdc2P43407 Mir7235-201ENSMUST00000183796 56 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc2P43407 Gm18382-201ENSMUST00000194394 582 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm43724-201ENSMUST00000197516 226 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm42999-201ENSMUST00000198049 786 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm17956-201ENSMUST00000199931 838 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm7128-201ENSMUST00000211639 533 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.98□□□□□ -1.61
Sdc2P43407 Gm29785-201ENSMUST00000217033 383 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.98□□□□□ -1.61
Sdc2P43407 AC123061.2-201ENSMUST00000226234 802 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc2P43407 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc2P43407 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc2P43407 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc2P43407 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc2P43407 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.98□□□□□ -1.61
Sdc2P43407 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc2P43407 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc2P43407 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc2P43407 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Sdc2P43407 Mir676-201ENSMUST00000102443 89 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Gm15058-201ENSMUST00000117689 458 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Gm15553-201ENSMUST00000118757 430 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Gm14695-201ENSMUST00000121721 282 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.97□□□□□ -1.61
Sdc2P43407 Gm23546-201ENSMUST00000158211 137 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.97□□□□□ -1.61
Sdc2P43407 Gm22243-201ENSMUST00000178754 120 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Gm44330-201ENSMUST00000200106 143 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Gm45610-201ENSMUST00000209227 784 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Supt4b-201ENSMUST00000214434 351 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 AC161252.2-201ENSMUST00000224978 374 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.97□□□□□ -1.61
Sdc2P43407 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Sdc2P43407 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc2P43407 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.97□□□□□ -1.61
Sdc2P43407 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Sdc2P43407 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Sdc2P43407 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Sdc2P43407 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
Sdc2P43407 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc2P43407 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
Sdc2P43407 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc2P43407 Gm14659-201ENSMUST00000117667 843 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Gm13149-201ENSMUST00000122071 339 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.96□□□□□ -1.62
Sdc2P43407 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.96□□□□□ -1.62
Sdc2P43407 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc2P43407 Olfr331-202ENSMUST00000170501 957 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Gm23162-201ENSMUST00000175081 121 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc2P43407 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Sdc2P43407 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Gm43586-201ENSMUST00000195948 310 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Gm45498-201ENSMUST00000210346 283 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sdc2P43407 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc2P43407 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc2P43407 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Sdc2P43407 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Sdc2P43407 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.96□□□□□ -1.62
Sdc2P43407 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sdc2P43407 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sdc2P43407 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.95□□□□□ -1.62
Sdc2P43407 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc2P43407 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sdc2P43407 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sdc2P43407 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.95□□□□□ -1.62
Sdc2P43407 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc2P43407 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sdc2P43407 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 147.8 ms