Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col18a1P39061 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col18a1P39061 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col18a1P39061 Gm33626-201ENSMUST00000206790 828 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Col18a1P39061 AC132384.5-201ENSMUST00000218562 226 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 AC110380.1-201ENSMUST00000226987 389 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col18a1P39061 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
Col18a1P39061 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col18a1P39061 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col18a1P39061 Gm37151-201ENSMUST00000194631 5007 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col18a1P39061 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Col18a1P39061 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col18a1P39061 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Col18a1P39061 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.85□□□□□ -1.31
Col18a1P39061 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col18a1P39061 Gm11798-201ENSMUST00000119150 421 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Gm11617-201ENSMUST00000119609 639 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Gm14725-201ENSMUST00000120324 828 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Defa-ps14-201ENSMUST00000121373 418 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col18a1P39061 Gm23317-201ENSMUST00000157999 129 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Gm28489-201ENSMUST00000186655 316 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Gm29389-201ENSMUST00000191562 352 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Gm43370-201ENSMUST00000196437 284 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Gm43004-201ENSMUST00000201872 703 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC6.85□□□□□ -1.31
Col18a1P39061 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC6.85□□□□□ -1.31
Col18a1P39061 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
Col18a1P39061 AC166358.6-201ENSMUST00000221834 1206 ntBASIC6.85□□□□□ -1.31
Col18a1P39061 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC6.85□□□□□ -1.31
Col18a1P39061 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Col18a1P39061 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Col18a1P39061 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
Col18a1P39061 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Gm36963-201ENSMUST00000193506 2324 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Col18a1P39061 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col18a1P39061 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col18a1P39061 Gm11483-201ENSMUST00000119839 247 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Gm11321-201ENSMUST00000121257 902 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Gm11385-201ENSMUST00000121513 570 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC6.84□□□□□ -1.31
Col18a1P39061 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col18a1P39061 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col18a1P39061 Gm38166-201ENSMUST00000191660 471 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC6.84□□□□□ -1.31
Col18a1P39061 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC6.84□□□□□ -1.31
Col18a1P39061 Gm44472-201ENSMUST00000204922 943 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Gm18259-201ENSMUST00000220991 2010 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Gm32300-201ENSMUST00000221735 515 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Gm9628-201ENSMUST00000222169 725 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Col18a1P39061 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.84□□□□□ -1.31
Col18a1P39061 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col18a1P39061 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col18a1P39061 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col18a1P39061 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col18a1P39061 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
Col18a1P39061 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col18a1P39061 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col18a1P39061 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.83□□□□□ -1.32
Col18a1P39061 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col18a1P39061 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col18a1P39061 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 AC139218.1-201ENSMUST00000228215 4287 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Col18a1P39061 Gm14933-201ENSMUST00000118840 481 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Gm22793-201ENSMUST00000157227 330 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col18a1P39061 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col18a1P39061 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Gm8823-201ENSMUST00000193158 433 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 AC161456.1-201ENSMUST00000206771 887 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms