Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col2a1P28481 Gm22758-201ENSMUST00000102275 96 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.23□□□□□ -1.57
Col2a1P28481 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col2a1P28481 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.23□□□□□ -1.57
Col2a1P28481 Gm25264-201ENSMUST00000158519 117 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.23□□□□□ -1.57
Col2a1P28481 Gm3339-201ENSMUST00000163462 475 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC5.23□□□□□ -1.57
Col2a1P28481 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col2a1P28481 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col2a1P28481 Gm22119-201ENSMUST00000175594 99 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.23□□□□□ -1.57
Col2a1P28481 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.23□□□□□ -1.57
Col2a1P28481 Gm18877-201ENSMUST00000207706 539 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col2a1P28481 Gm23464-201ENSMUST00000083145 147 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col2a1P28481 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.23□□□□□ -1.57
Col2a1P28481 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col2a1P28481 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col2a1P28481 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col2a1P28481 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col2a1P28481 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
Col2a1P28481 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col2a1P28481 Gm14753-201ENSMUST00000118503 246 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 Gm15075-201ENSMUST00000122187 477 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col2a1P28481 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.22□□□□□ -1.57
Col2a1P28481 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.22□□□□□ -1.57
Col2a1P28481 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col2a1P28481 Gm7808-201ENSMUST00000082002 387 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col2a1P28481 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col2a1P28481 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col2a1P28481 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Col2a1P28481 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.22□□□□□ -1.57
Col2a1P28481 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col2a1P28481 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC5.22□□□□□ -1.57
Col2a1P28481 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col2a1P28481 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col2a1P28481 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col2a1P28481 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
Col2a1P28481 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.21□□□□□ -1.58
Col2a1P28481 Gm13787-201ENSMUST00000120422 168 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 Gm22613-201ENSMUST00000122679 292 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 Gm26347-201ENSMUST00000157526 131 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 Gm6802-202ENSMUST00000186566 126 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col2a1P28481 Gm38053-201ENSMUST00000193938 160 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 Gm44234-201ENSMUST00000204246 900 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col2a1P28481 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col2a1P28481 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col2a1P28481 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col2a1P28481 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Col2a1P28481 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col2a1P28481 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col2a1P28481 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.21□□□□□ -1.58
Col2a1P28481 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col2a1P28481 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col2a1P28481 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm24048-201ENSMUST00000102411 106 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm24544-201ENSMUST00000103862 110 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Gm23273-201ENSMUST00000104058 135 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm22637-201ENSMUST00000158144 283 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Gm26362-201ENSMUST00000158865 315 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Gm18183-201ENSMUST00000191024 615 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm5876-201ENSMUST00000203735 243 ntBASIC5.2□□□□□ -1.58
Col2a1P28481 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col2a1P28481 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 131.6 ms