Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm25937-201ENSMUST00000083912 107 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm45221-201ENSMUST00000207822 2272 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Amy2b-201ENSMUST00000120184 1577 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm10743-201ENSMUST00000219611 2358 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm44130-201ENSMUST00000205157 3004 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm38244-201ENSMUST00000191737 2586 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm30698-201ENSMUST00000214789 3198 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 AC159195.2-201ENSMUST00000223670 3757 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm22231-201ENSMUST00000101027 73 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm9144-201ENSMUST00000101625 1008 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm15310-201ENSMUST00000117891 372 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm6987-201ENSMUST00000119319 428 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm12087-201ENSMUST00000121878 258 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm22492-201ENSMUST00000157192 297 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm24914-201ENSMUST00000157285 313 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm25384-201ENSMUST00000157807 105 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm25362-201ENSMUST00000158854 105 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm6264-201ENSMUST00000160802 624 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm17148-201ENSMUST00000164702 249 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm2619-202ENSMUST00000166777 651 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm22642-201ENSMUST00000175352 252 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm28801-201ENSMUST00000188761 449 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm37757-201ENSMUST00000193072 210 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm5694-201ENSMUST00000195648 641 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm42580-201ENSMUST00000197223 753 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm44059-201ENSMUST00000204048 351 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm45724-201ENSMUST00000213031 420 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Hoxd3P09027 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm46379-201ENSMUST00000222551 265 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm10108-201ENSMUST00000078246 319 ntBASIC5.4□□□□□ -1.54
Hoxd3P09027 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxd3P09027 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd3P09027 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd3P09027 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.4□□□□□ -1.55
Hoxd3P09027 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Hoxd3P09027 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd3P09027 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd3P09027 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd3P09027 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd3P09027 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC5.4□□□□□ -1.55
Hoxd3P09027 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Hoxd3P09027 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Hoxd3P09027 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm9874-202ENSMUST00000194957 1464 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms