Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm14473-201ENSMUST00000122269 557 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm4134-201ENSMUST00000173244 563 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm44209-201ENSMUST00000204556 4153 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Gm9712-201ENSMUST00000210842 311 ntBASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a3E9PWQ3 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm12156-201ENSMUST00000119188 554 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm24008-201ENSMUST00000157733 138 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm44393-201ENSMUST00000197418 138 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm5649-201ENSMUST00000217918 951 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm24788-201ENSMUST00000104283 156 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm11408-201ENSMUST00000117889 519 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm25907-201ENSMUST00000158486 125 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm272-201ENSMUST00000222073 919 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm15018-201ENSMUST00000117090 633 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm23964-201ENSMUST00000157966 107 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm7041-201ENSMUST00000201227 524 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Gm6562-201ENSMUST00000221903 464 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.47□□□□□ -1.69
Col6a3E9PWQ3 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Col6a3E9PWQ3 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Col6a3E9PWQ3 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
Col6a3E9PWQ3 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
Col6a3E9PWQ3 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Col6a3E9PWQ3 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Gm13902-201ENSMUST00000120168 605 ntBASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Gm37152-201ENSMUST00000193369 1175 ntBASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Gm8069-201ENSMUST00000197887 154 ntBASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 AC156645.1-201ENSMUST00000223066 5194 ntBASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Mir6916-201ENSMUST00000184514 63 ntBASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Gm29240-201ENSMUST00000187248 286 ntBASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a3E9PWQ3 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm22243-201ENSMUST00000178754 120 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Gm18194-201ENSMUST00000210455 481 ntBASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a3E9PWQ3 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms