Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H2afb2S4R1M3 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
H2afb2S4R1M3 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H2afb2S4R1M3 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.67□□□□□ -1.66
H2afb2S4R1M3 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H2afb2S4R1M3 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.67□□□□□ -1.66
H2afb2S4R1M3 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.67□□□□□ -1.66
H2afb2S4R1M3 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm23193-201ENSMUST00000102427 82 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm24124-201ENSMUST00000104103 132 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm13771-201ENSMUST00000117988 238 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm12231-201ENSMUST00000119447 695 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm14784-201ENSMUST00000121604 663 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm20428-201ENSMUST00000174365 283 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm5558-201ENSMUST00000178933 495 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm16378-201ENSMUST00000179168 342 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm5066-201ENSMUST00000188479 822 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm29036-201ENSMUST00000189967 877 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm29332-201ENSMUST00000190829 227 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm37636-201ENSMUST00000193583 359 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm43005-201ENSMUST00000199015 648 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm32308-201ENSMUST00000203053 280 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm43894-201ENSMUST00000203274 688 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm6065-201ENSMUST00000081336 492 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Snora52-201ENSMUST00000082732 137 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Mir17-201ENSMUST00000083574 84 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm6043-201ENSMUST00000099961 492 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
H2afb2S4R1M3 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.65□□□□□ -1.66
H2afb2S4R1M3 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
H2afb2S4R1M3 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm12062-201ENSMUST00000117533 259 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm9208-201ENSMUST00000120468 948 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm15530-201ENSMUST00000122206 555 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm22870-201ENSMUST00000157501 112 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm25923-201ENSMUST00000158312 138 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Mir5103-201ENSMUST00000175111 79 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm17790-201ENSMUST00000191545 1228 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm43144-201ENSMUST00000198256 485 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm17775-201ENSMUST00000198542 258 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm18330-201ENSMUST00000199246 547 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm29793-201ENSMUST00000202874 460 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm44237-201ENSMUST00000205183 936 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm44523-201ENSMUST00000205616 417 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.65□□□□□ -1.67
H2afb2S4R1M3 Gm17811-201ENSMUST00000206193 387 ntBASIC4.65□□□□□ -1.67
H2afb2S4R1M3 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms