Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm14385-201ENSMUST00000116315 876 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Mir7006-201ENSMUST00000183624 69 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm9442-201ENSMUST00000194242 319 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm43925-201ENSMUST00000203498 206 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm9512-201ENSMUST00000223112 497 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim3Q9R1R2 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm12039-201ENSMUST00000118219 180 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm3267-201ENSMUST00000118671 473 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm12704-201ENSMUST00000119789 464 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm14516-201ENSMUST00000120012 252 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm15780-201ENSMUST00000121283 935 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm23633-201ENSMUST00000175293 119 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm29552-201ENSMUST00000190548 660 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.6□□□□□ -1.67
Trim3Q9R1R2 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Trim3Q9R1R2 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm13195-201ENSMUST00000117229 261 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm15779-201ENSMUST00000117470 412 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm14861-201ENSMUST00000119451 455 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm12685-201ENSMUST00000121702 214 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm15227-201ENSMUST00000121844 399 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm22958-201ENSMUST00000122512 184 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm23327-201ENSMUST00000157420 78 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm22383-201ENSMUST00000158188 327 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Gm24944-201ENSMUST00000158330 128 ntBASIC4.59□□□□□ -1.67
Trim3Q9R1R2 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms