Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm24265-201ENSMUST00000101833 141 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Mir708-201ENSMUST00000102189 109 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm25213-201ENSMUST00000102388 113 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm25396-201ENSMUST00000103981 133 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm12535-201ENSMUST00000121025 484 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm12095-201ENSMUST00000121962 816 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm23118-201ENSMUST00000122657 187 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm22216-201ENSMUST00000157557 114 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm24680-201ENSMUST00000158759 126 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm24157-201ENSMUST00000175265 111 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm24810-201ENSMUST00000175317 70 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm27660-201ENSMUST00000184028 208 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm28146-201ENSMUST00000185517 701 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm28574-201ENSMUST00000185757 699 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm28397-201ENSMUST00000187970 699 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm28117-201ENSMUST00000188472 371 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm28665-201ENSMUST00000189269 670 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm29366-201ENSMUST00000190481 699 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm28188-201ENSMUST00000190483 236 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm6510-201ENSMUST00000195916 574 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm43652-201ENSMUST00000196219 675 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm44342-201ENSMUST00000196874 129 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm5853-201ENSMUST00000197183 632 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm44383-201ENSMUST00000198940 129 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm45122-201ENSMUST00000206376 784 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm4042-201ENSMUST00000216946 637 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm46203-201ENSMUST00000218130 478 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm36501-201ENSMUST00000221857 745 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm5653-201ENSMUST00000223393 1337 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm12468-201ENSMUST00000116189 404 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm13890-201ENSMUST00000117578 390 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm15387-201ENSMUST00000120421 648 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm25294-201ENSMUST00000122791 104 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm22819-201ENSMUST00000157445 303 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm6264-202ENSMUST00000162896 1217 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm18953-201ENSMUST00000175694 300 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm23648-201ENSMUST00000180301 107 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Gm27360-201ENSMUST00000183487 80 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC6.06□□□□□ -1.44
Trim39Q9ESN2 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms