Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm23214-201ENSMUST00000122716 157 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm24435-201ENSMUST00000157886 110 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm23864-201ENSMUST00000177607 107 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Mir6921-201ENSMUST00000183719 80 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm29519-201ENSMUST00000186994 398 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm17934-201ENSMUST00000192818 422 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm42832-201ENSMUST00000196361 745 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm23011-202ENSMUST00000197855 275 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm43083-201ENSMUST00000199594 476 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm43941-201ENSMUST00000203303 1073 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm45150-201ENSMUST00000206051 467 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 AC124826.1-201ENSMUST00000221651 325 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 AC131745.2-201ENSMUST00000225736 565 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ube3bQ9ES34 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm45322-201ENSMUST00000211642 1361 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm16106-201ENSMUST00000119187 294 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm14162-201ENSMUST00000121985 601 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm15840-201ENSMUST00000122099 943 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm6541-201ENSMUST00000165542 561 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm17366-201ENSMUST00000167629 187 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm8532-201ENSMUST00000179174 461 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm43392-201ENSMUST00000196560 434 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm19202-201ENSMUST00000198096 808 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm35876-201ENSMUST00000205044 459 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.47□□□□□ -1.21
Ube3bQ9ES34 Gm19552-201ENSMUST00000194744 2833 ntBASIC7.46□□□□□ -1.21
Ube3bQ9ES34 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.46□□□□□ -1.21
Ube3bQ9ES34 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Ube3bQ9ES34 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
Ube3bQ9ES34 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ube3bQ9ES34 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ube3bQ9ES34 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ube3bQ9ES34 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ube3bQ9ES34 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ube3bQ9ES34 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Ube3bQ9ES34 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms