Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm24069-201ENSMUST00000104512 127 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm7146-201ENSMUST00000116079 739 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm14531-201ENSMUST00000120845 285 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm13998-201ENSMUST00000120952 335 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm15840-201ENSMUST00000122099 943 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm25902-201ENSMUST00000158493 318 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm26211-201ENSMUST00000158578 129 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm27957-201ENSMUST00000184054 127 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm43467-201ENSMUST00000197441 437 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm29736-201ENSMUST00000198189 385 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm7570-201ENSMUST00000215246 698 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 CT025680.1-201ENSMUST00000217375 375 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm18113-201ENSMUST00000220630 303 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm8412-201ENSMUST00000077493 440 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm23624-201ENSMUST00000082463 321 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim11Q99PQ2 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm16074-201ENSMUST00000119524 444 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm13230-201ENSMUST00000120870 1575 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm12900-201ENSMUST00000120919 573 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm12807-201ENSMUST00000121546 962 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm22733-201ENSMUST00000158094 91 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm24682-201ENSMUST00000158764 137 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm18808-201ENSMUST00000173316 462 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm23162-201ENSMUST00000175081 121 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm24812-201ENSMUST00000175315 284 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm44316-201ENSMUST00000199274 97 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm43406-201ENSMUST00000200356 334 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm45689-201ENSMUST00000210522 133 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 AC170810.3-201ENSMUST00000226177 374 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 AC166344.2-201ENSMUST00000226747 374 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms