Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm11914-201ENSMUST00000117094 507 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm13788-201ENSMUST00000120767 601 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm12041-201ENSMUST00000121606 602 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm13602-201ENSMUST00000122405 493 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm24438-201ENSMUST00000157893 115 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm3111-201ENSMUST00000167426 490 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RtcbQ99LF4 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm26092-201ENSMUST00000179798 97 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Mir669a-1-201ENSMUST00000180238 97 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm21006-201ENSMUST00000196930 667 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm33952-201ENSMUST00000197795 408 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm31230-201ENSMUST00000199725 785 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm43472-201ENSMUST00000200175 154 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 AC145736.1-201ENSMUST00000214661 479 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Gm18997-201ENSMUST00000216353 822 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 AC139376.1-201ENSMUST00000220056 1250 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC7.13□□□□□ -1.27
RtcbQ99LF4 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RtcbQ99LF4 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm1966-201ENSMUST00000184540 7293 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm42540-201ENSMUST00000200319 2008 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm16394-201ENSMUST00000117289 675 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm9498-201ENSMUST00000140849 291 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm5252-201ENSMUST00000189030 909 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Trbv22-201ENSMUST00000191697 291 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm2053-201ENSMUST00000195671 631 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm44403-201ENSMUST00000198554 129 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm2314-201ENSMUST00000200391 586 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm29920-201ENSMUST00000206876 754 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 AC238676.3-201ENSMUST00000223042 154 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 AC154626.1-201ENSMUST00000226070 311 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 AC160930.1-201ENSMUST00000227194 337 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm7204-201ENSMUST00000062591 600 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm9386-201ENSMUST00000095195 381 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 CT009734.1-201ENSMUST00000227657 1687 ntBASIC7.12□□□□□ -1.27
RtcbQ99LF4 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RtcbQ99LF4 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RtcbQ99LF4 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RtcbQ99LF4 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RtcbQ99LF4 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RtcbQ99LF4 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RtcbQ99LF4 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RtcbQ99LF4 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RtcbQ99LF4 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RtcbQ99LF4 Mir804-201ENSMUST00000103251 95 ntBASIC7.11□□□□□ -1.27
RtcbQ99LF4 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RtcbQ99LF4 Gm7974-201ENSMUST00000117154 408 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms