Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm26106-201ENSMUST00000157254 228 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm15970-201ENSMUST00000160623 834 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm20453-201ENSMUST00000173968 226 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm24303-201ENSMUST00000178237 126 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm7745-201ENSMUST00000182235 973 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm27158-201ENSMUST00000183813 238 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm27428-201ENSMUST00000184289 110 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm7870-201ENSMUST00000184467 616 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm28973-201ENSMUST00000189310 613 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm18444-201ENSMUST00000191239 629 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm43743-202ENSMUST00000198353 491 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm17988-201ENSMUST00000208796 535 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm46234-201ENSMUST00000218702 259 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm6068-201ENSMUST00000222270 387 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm24490-201ENSMUST00000083803 98 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.54□□□□□ -1.52
Ndc1Q8VCB1 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm15916-201ENSMUST00000118355 736 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm14082-201ENSMUST00000118582 801 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm7421-201ENSMUST00000119298 639 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm8545-201ENSMUST00000120692 801 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm7365-201ENSMUST00000120877 639 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm22755-201ENSMUST00000157143 100 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm22080-201ENSMUST00000157591 106 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm5929-201ENSMUST00000166883 487 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm8256-201ENSMUST00000169178 453 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm27036-201ENSMUST00000182465 980 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 Mir7037-201ENSMUST00000184414 65 ntBASIC5.53□□□□□ -1.52
Ndc1Q8VCB1 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms