Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm44485-201ENSMUST00000199569 137 ntBASIC6.52□□□□□ -1.37
Usp54Q8BL06 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Usp54Q8BL06 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Usp54Q8BL06 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Usp54Q8BL06 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp54Q8BL06 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Usp54Q8BL06 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm14784-201ENSMUST00000121604 663 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm15038-201ENSMUST00000122144 296 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm22453-201ENSMUST00000122801 318 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm37700-201ENSMUST00000192617 965 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm7449-201ENSMUST00000194393 663 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm45171-201ENSMUST00000206360 736 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp54Q8BL06 n-R5s3-201ENSMUST00000083879 112 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.51□□□□□ -1.37
Usp54Q8BL06 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp54Q8BL06 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm45211-201ENSMUST00000206208 2650 ntBASIC6.5□□□□□ -1.37
Usp54Q8BL06 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm42694-201ENSMUST00000196951 358 ntBASIC6.5□□□□□ -1.37
Usp54Q8BL06 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 AC102603.1-201ENSMUST00000227481 584 ntBASIC6.5□□□□□ -1.37
Usp54Q8BL06 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Usp54Q8BL06 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp54Q8BL06 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.49□□□□□ -1.37
Usp54Q8BL06 Mir551b-201ENSMUST00000102165 98 ntBASIC6.49□□□□□ -1.37
Usp54Q8BL06 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Gm25169-201ENSMUST00000104190 129 ntBASIC6.49□□□□□ -1.37
Usp54Q8BL06 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Gm11742-201ENSMUST00000119903 233 ntBASIC6.49□□□□□ -1.37
Usp54Q8BL06 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.49□□□□□ -1.37
Usp54Q8BL06 Gm5876-201ENSMUST00000203735 243 ntBASIC6.49□□□□□ -1.37
Usp54Q8BL06 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Gm7452-202ENSMUST00000202891 3039 ntBASIC6.49□□□□□ -1.37
Usp54Q8BL06 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Usp54Q8BL06 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp54Q8BL06 Gm6584-201ENSMUST00000119671 447 ntBASIC6.48□□□□□ -1.37
Usp54Q8BL06 Gm45359-201ENSMUST00000210635 427 ntBASIC6.48□□□□□ -1.37
Usp54Q8BL06 Gm19095-201ENSMUST00000220533 730 ntBASIC6.48□□□□□ -1.37
Usp54Q8BL06 AC122357.1-201ENSMUST00000221652 1515 ntBASIC6.48□□□□□ -1.37
Usp54Q8BL06 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.48□□□□□ -1.37
Usp54Q8BL06 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Usp54Q8BL06 AC108802.1-201ENSMUST00000219501 3142 ntBASIC6.48□□□□□ -1.37
Usp54Q8BL06 Gm38106-201ENSMUST00000194107 2534 ntBASIC6.48□□□□□ -1.37
Usp54Q8BL06 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Usp54Q8BL06 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Usp54Q8BL06 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
Usp54Q8BL06 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp54Q8BL06 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC6.48□□□□□ -1.37
Usp54Q8BL06 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Usp54Q8BL06 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms