Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm15087-201ENSMUST00000117465 1172 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm12677-201ENSMUST00000118668 426 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm12565-201ENSMUST00000119004 649 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm15452-201ENSMUST00000119877 240 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm14852-201ENSMUST00000120065 647 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm14238-201ENSMUST00000120227 323 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm13578-201ENSMUST00000120849 590 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm24687-201ENSMUST00000157758 241 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm23343-201ENSMUST00000158964 143 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm7870-201ENSMUST00000184467 616 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm18700-201ENSMUST00000185791 553 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm5116-201ENSMUST00000187732 463 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm29627-201ENSMUST00000187984 463 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm8241-201ENSMUST00000189286 816 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm38050-201ENSMUST00000191904 238 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm3351-201ENSMUST00000193454 505 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37586-201ENSMUST00000193654 204 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43354-201ENSMUST00000196862 346 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43406-201ENSMUST00000200356 334 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm44075-201ENSMUST00000204208 216 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm45789-201ENSMUST00000213038 364 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm3785-201ENSMUST00000221000 202 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sh3rf1Q69ZI1 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm14918-201ENSMUST00000118153 268 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm6664-201ENSMUST00000119138 468 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm11252-201ENSMUST00000120572 939 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm24910-201ENSMUST00000157289 272 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm26037-201ENSMUST00000158150 311 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm22076-201ENSMUST00000158601 84 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm20453-201ENSMUST00000173968 226 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm9632-201ENSMUST00000195934 643 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm43116-201ENSMUST00000199789 195 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Ighv1-79-201ENSMUST00000200152 350 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm7890-201ENSMUST00000204877 601 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm18644-201ENSMUST00000211458 815 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm9321-201ENSMUST00000221179 778 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 AC113031.5-201ENSMUST00000227116 606 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Gm6436-201ENSMUST00000077163 451 ntBASIC6.16□□□□□ -1.42
Sh3rf1Q69ZI1 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms