Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim28Q62318 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim28Q62318 Gm25799-201ENSMUST00000082643 107 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.54□□□□□ -1.36
Trim28Q62318 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim28Q62318 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim28Q62318 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.54□□□□□ -1.36
Trim28Q62318 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim28Q62318 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trim28Q62318 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Trim28Q62318 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Trim28Q62318 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim28Q62318 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Trim28Q62318 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim28Q62318 Gm8858-201ENSMUST00000118259 342 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm11212-201ENSMUST00000118337 618 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm14848-201ENSMUST00000121850 467 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim28Q62318 Gm15878-201ENSMUST00000127561 306 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm16259-201ENSMUST00000145241 553 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim28Q62318 Gm26034-201ENSMUST00000158154 116 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm22361-201ENSMUST00000158435 176 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm8151-201ENSMUST00000184817 871 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm28567-201ENSMUST00000190270 693 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm37044-201ENSMUST00000193531 693 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm38369-201ENSMUST00000195101 693 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm43245-201ENSMUST00000197603 468 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim28Q62318 Gm45551-201ENSMUST00000211459 928 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Gm7128-201ENSMUST00000211639 533 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim28Q62318 Gm18899-201ENSMUST00000217663 546 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 AV026068-220ENSMUST00000224153 1147 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim28Q62318 Gm44171-201ENSMUST00000203701 2109 ntBASIC6.53□□□□□ -1.36
Trim28Q62318 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Trim28Q62318 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim28Q62318 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim28Q62318 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim28Q62318 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim28Q62318 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim28Q62318 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim28Q62318 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim28Q62318 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.36
Trim28Q62318 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Gm44751-201ENSMUST00000208302 4387 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm23987-201ENSMUST00000117039 129 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Gm14610-201ENSMUST00000118358 966 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Gm13867-201ENSMUST00000120844 395 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Gm11896-201ENSMUST00000121105 820 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Gm12706-201ENSMUST00000121588 698 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm6647-201ENSMUST00000170514 641 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm22254-201ENSMUST00000179186 110 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC6.52□□□□□ -1.37
Trim28Q62318 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm37000-201ENSMUST00000193058 428 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Mir703-201ENSMUST00000197105 109 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Gm43309-201ENSMUST00000200837 458 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim28Q62318 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC6.52□□□□□ -1.37
Trim28Q62318 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim28Q62318 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim28Q62318 Olfr815-201ENSMUST00000071557 951 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim28Q62318 Gm24166-201ENSMUST00000082724 135 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Snora52-201ENSMUST00000082732 137 ntBASIC6.52□□□□□ -1.37
Trim28Q62318 Gm22287-201ENSMUST00000083197 107 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms