Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Mir292-201ENSMUST00000104847 82 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm15603-201ENSMUST00000119252 492 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm13501-201ENSMUST00000118477 979 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm11631-201ENSMUST00000119220 156 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc88aQ5SNZ0 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc88aQ5SNZ0 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc88aQ5SNZ0 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc88aQ5SNZ0 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc88aQ5SNZ0 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm8069-201ENSMUST00000197887 154 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm9057-201ENSMUST00000198791 296 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm21461-201ENSMUST00000200382 863 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm44816-201ENSMUST00000206666 477 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm44582-201ENSMUST00000209125 445 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm10705-201ENSMUST00000098980 461 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm11874-201ENSMUST00000117437 130 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm11761-201ENSMUST00000121392 445 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm3077-201ENSMUST00000165903 627 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm20428-201ENSMUST00000174365 283 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm45081-201ENSMUST00000206281 572 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm19201-201ENSMUST00000210127 778 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm26165-201ENSMUST00000083791 138 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms