Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm36382-201ENSMUST00000198892 541 ntBASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Gm18611-201ENSMUST00000200334 1118 ntBASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Gm44857-201ENSMUST00000208331 196 ntBASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Gm3912-203ENSMUST00000211024 367 ntBASIC4.85□□□□□ -1.63
Brf2Q3UAW9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 AC122465.3-201ENSMUST00000221644 355 ntBASIC4.85□□□□□ -1.63
Brf2Q3UAW9 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 CT030166.1-201ENSMUST00000222654 357 ntBASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Mir449a-201ENSMUST00000083641 91 ntBASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Brf2Q3UAW9 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Mir804-201ENSMUST00000103251 95 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm24429-201ENSMUST00000104076 132 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm7206-201ENSMUST00000117730 508 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm3943-201ENSMUST00000118606 718 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm13172-201ENSMUST00000118685 256 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm15791-201ENSMUST00000120365 319 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm14363-201ENSMUST00000122304 409 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm14368-201ENSMUST00000145305 415 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Mir7222-201ENSMUST00000183740 75 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm37837-201ENSMUST00000191743 604 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm37219-201ENSMUST00000192036 926 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm38011-201ENSMUST00000193312 279 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm10048-201ENSMUST00000194196 372 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm44392-201ENSMUST00000196758 115 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm43215-201ENSMUST00000199108 252 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm9373-201ENSMUST00000208724 599 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm45874-201ENSMUST00000212423 346 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm18997-201ENSMUST00000216353 822 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 AC164629.1-201ENSMUST00000220250 1113 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm2645-201ENSMUST00000223516 547 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 AC157572.4-201ENSMUST00000228203 549 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Brf2Q3UAW9 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Brf2Q3UAW9 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Brf2Q3UAW9 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Brf2Q3UAW9 Gm23750-201ENSMUST00000104222 132 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms