Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm43715-201ENSMUST00000196307 2715 ntBASIC7.71□□□□□ -1.18
Col17a1Q07563 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col17a1Q07563 AC120375.1-201ENSMUST00000227034 3612 ntBASIC7.71□□□□□ -1.18
Col17a1Q07563 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col17a1Q07563 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Col17a1Q07563 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col17a1Q07563 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col17a1Q07563 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col17a1Q07563 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col17a1Q07563 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col17a1Q07563 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col17a1Q07563 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm7919-201ENSMUST00000202043 1389 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Defa-ps15-201ENSMUST00000118178 477 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm12231-201ENSMUST00000119447 695 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm6632-201ENSMUST00000168425 954 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm26914-201ENSMUST00000182262 223 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm6802-202ENSMUST00000186566 126 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Ighv8-1-201ENSMUST00000194897 291 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm20940-201ENSMUST00000197308 360 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm25260-201ENSMUST00000083053 134 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm37051-201ENSMUST00000194535 2943 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Gm43577-201ENSMUST00000197090 3344 ntBASIC7.7□□□□□ -1.18
Col17a1Q07563 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col17a1Q07563 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Col17a1Q07563 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm11698-201ENSMUST00000117948 455 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm12850-201ENSMUST00000119210 436 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm6806-201ENSMUST00000120092 1006 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm23782-201ENSMUST00000157939 120 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Mir6914-201ENSMUST00000184999 69 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm29793-201ENSMUST00000202874 460 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm18599-201ENSMUST00000206729 1125 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm18043-201ENSMUST00000216741 739 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Col17a1Q07563 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col17a1Q07563 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm37079-201ENSMUST00000194114 2135 ntBASIC7.69□□□□□ -1.18
Col17a1Q07563 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col17a1Q07563 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col17a1Q07563 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col17a1Q07563 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col17a1Q07563 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col17a1Q07563 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col17a1Q07563 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Col17a1Q07563 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm15364-201ENSMUST00000119618 585 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm11829-201ENSMUST00000121003 282 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm22718-201ENSMUST00000122701 315 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm27158-201ENSMUST00000183813 238 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC7.68□□□□□ -1.18
Col17a1Q07563 Gm8774-201ENSMUST00000203621 692 ntBASIC7.68□□□□□ -1.18
Col17a1Q07563 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms