Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 CT025603.4-201ENSMUST00000225777 413 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.93□□□□□ -1.46
Sox9Q04887 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Sox9Q04887 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox9Q04887 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox9Q04887 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Gm24117-201ENSMUST00000103973 133 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Gm13491-201ENSMUST00000118267 235 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm6427-201ENSMUST00000118721 979 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm12654-201ENSMUST00000120387 587 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm15157-201ENSMUST00000121852 702 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm23631-201ENSMUST00000175291 123 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm38261-201ENSMUST00000192608 316 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm37979-201ENSMUST00000193065 712 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
Sox9Q04887 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.92□□□□□ -1.46
Sox9Q04887 Gm43157-201ENSMUST00000198223 412 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Gm7946-201ENSMUST00000203326 958 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm44058-201ENSMUST00000204335 467 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.92□□□□□ -1.46
Sox9Q04887 AC160962.2-201ENSMUST00000224761 632 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Gm23626-201ENSMUST00000082458 133 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm23624-201ENSMUST00000082463 321 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Gm26176-201ENSMUST00000083795 105 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox9Q04887 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox9Q04887 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.92□□□□□ -1.46
Sox9Q04887 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox9Q04887 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Sox9Q04887 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox9Q04887 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox9Q04887 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sox9Q04887 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm11826-201ENSMUST00000118781 438 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm14515-201ENSMUST00000121327 216 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm15152-201ENSMUST00000121540 394 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm15488-201ENSMUST00000121682 670 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.91□□□□□ -1.46
Sox9Q04887 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox9Q04887 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Sox9Q04887 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox9Q04887 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms