Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm29211-201ENSMUST00000191470 664 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 Gm38149-201ENSMUST00000191943 339 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 Gm35212-201ENSMUST00000196672 606 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 Gm43489-201ENSMUST00000196810 993 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 Gm45156-201ENSMUST00000207255 439 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 Gm45689-201ENSMUST00000210522 133 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 AC151843.1-201ENSMUST00000215960 691 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcc1P97496 Gm26072-201ENSMUST00000083135 107 ntBASIC6.77□□□□□ -1.33
Smarcc1P97496 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcc1P97496 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcc1P97496 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcc1P97496 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcc1P97496 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smarcc1P97496 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm24469-201ENSMUST00000104487 131 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm14756-201ENSMUST00000116395 240 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm14998-201ENSMUST00000120502 495 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm24561-201ENSMUST00000175182 95 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm37336-202ENSMUST00000193705 468 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Rnu3a-202ENSMUST00000196710 213 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm18635-201ENSMUST00000199020 1060 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm19617-201ENSMUST00000202977 308 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Rnu3a-201ENSMUST00000083936 214 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm10540-201ENSMUST00000097581 276 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Smarcc1P97496 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.76□□□□□ -1.33
Smarcc1P97496 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Smarcc1P97496 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.75□□□□□ -1.33
Smarcc1P97496 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smarcc1P97496 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smarcc1P97496 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Smarcc1P97496 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm12985-201ENSMUST00000118376 183 ntBASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm11617-201ENSMUST00000119609 639 ntBASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm13149-201ENSMUST00000122071 339 ntBASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Smarcc1P97496 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm23534-201ENSMUST00000157539 97 ntBASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm22916-201ENSMUST00000157616 119 ntBASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm25865-201ENSMUST00000158247 104 ntBASIC6.75□□□□□ -1.33
Smarcc1P97496 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Smarcc1P97496 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.75□□□□□ -1.33
Smarcc1P97496 Gm4412-201ENSMUST00000186660 433 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms