Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Cux1P53564 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Cux1P53564 Gm18422-202ENSMUST00000203798 2214 ntBASIC7.08□□□□□ -1.28
Cux1P53564 Gm43696-201ENSMUST00000199385 6071 ntBASIC7.07□□□□□ -1.28
Cux1P53564 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cux1P53564 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cux1P53564 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC7.07□□□□□ -1.28
Cux1P53564 Gm14122-201ENSMUST00000122076 973 ntBASIC7.07□□□□□ -1.28
Cux1P53564 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cux1P53564 Gm8498-201ENSMUST00000188227 974 ntBASIC7.07□□□□□ -1.28
Cux1P53564 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cux1P53564 Gm42694-201ENSMUST00000196951 358 ntBASIC7.07□□□□□ -1.28
Cux1P53564 Gm18016-201ENSMUST00000216119 801 ntBASIC7.07□□□□□ -1.28
Cux1P53564 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cux1P53564 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cux1P53564 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC7.07□□□□□ -1.28
Cux1P53564 n-R5s167-201ENSMUST00000083227 121 ntBASIC7.07□□□□□ -1.28
Cux1P53564 n-R5s3-201ENSMUST00000083879 112 ntBASIC7.07□□□□□ -1.28
Cux1P53564 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cux1P53564 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Cux1P53564 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cux1P53564 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cux1P53564 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cux1P53564 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cux1P53564 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cux1P53564 Gm43164-201ENSMUST00000202529 2128 ntBASIC7.07□□□□□ -1.28
Cux1P53564 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Cux1P53564 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Cux1P53564 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cux1P53564 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC7.06□□□□□ -1.28
Cux1P53564 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC7.06□□□□□ -1.28
Cux1P53564 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC7.06□□□□□ -1.28
Cux1P53564 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC7.06□□□□□ -1.28
Cux1P53564 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC7.06□□□□□ -1.28
Cux1P53564 Gm8556-201ENSMUST00000210437 664 ntBASIC7.06□□□□□ -1.28
Cux1P53564 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Cux1P53564 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cux1P53564 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cux1P53564 AC124556.1-201ENSMUST00000218256 1319 ntBASIC7.06□□□□□ -1.28
Cux1P53564 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Cux1P53564 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cux1P53564 Gm15076-201ENSMUST00000117076 474 ntBASIC7.06□□□□□ -1.28
Cux1P53564 Gm25713-201ENSMUST00000158625 109 ntBASIC7.06□□□□□ -1.28
Cux1P53564 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC7.06□□□□□ -1.28
Cux1P53564 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Cux1P53564 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC7.06□□□□□ -1.28
Cux1P53564 Gm11394-201ENSMUST00000181421 517 ntBASIC7.06□□□□□ -1.28
Cux1P53564 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Cux1P53564 Gm5660-201ENSMUST00000197453 1149 ntBASIC7.06□□□□□ -1.28
Cux1P53564 AC119241.1-201ENSMUST00000223651 534 ntBASIC7.06□□□□□ -1.28
Cux1P53564 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Cux1P53564 n-R5s162-201ENSMUST00000082581 119 ntBASIC7.06□□□□□ -1.28
Cux1P53564 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Cux1P53564 Gm37668-201ENSMUST00000193745 1944 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cux1P53564 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC7.05□□□□□ -1.28
Cux1P53564 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cux1P53564 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cux1P53564 Gm12245-201ENSMUST00000117266 357 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Gm13311-201ENSMUST00000117863 379 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Gm14603-201ENSMUST00000121275 448 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Gm22453-201ENSMUST00000122801 318 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Cux1P53564 Gm14710-201ENSMUST00000146082 1066 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Gm25264-201ENSMUST00000158519 117 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Mir6537-201ENSMUST00000184150 110 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Gm27760-201ENSMUST00000185048 114 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Gm37857-201ENSMUST00000191784 1199 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Gm37659-201ENSMUST00000194574 111 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC7.05□□□□□ -1.28
Cux1P53564 Gm45171-201ENSMUST00000206360 736 ntBASIC7.05□□□□□ -1.28
Cux1P53564 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC7.05□□□□□ -1.28
Cux1P53564 AC154371.1-201ENSMUST00000226600 412 ntBASIC7.05□□□□□ -1.28
Cux1P53564 AC154738.5-201ENSMUST00000227397 310 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cux1P53564 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cux1P53564 Gm42658-201ENSMUST00000197199 1575 ntBASIC7.05□□□□□ -1.28
Cux1P53564 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Cux1P53564 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Cux1P53564 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Cux1P53564 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Cux1P53564 Gm8979-201ENSMUST00000183386 7296 ntBASIC7.04□□□□□ -1.28
Cux1P53564 Gm23115-201ENSMUST00000158480 108 ntBASIC7.04□□□□□ -1.28
Cux1P53564 Gm26219-201ENSMUST00000175216 71 ntBASIC7.04□□□□□ -1.28
Cux1P53564 Gm38201-201ENSMUST00000192143 387 ntBASIC7.04□□□□□ -1.28
Cux1P53564 AC140209.1-204ENSMUST00000226736 739 ntBASIC7.04□□□□□ -1.28
Cux1P53564 AC102603.1-201ENSMUST00000227481 584 ntBASIC7.04□□□□□ -1.28
Cux1P53564 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Cux1P53564 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Cux1P53564 Gm26165-201ENSMUST00000083791 138 ntBASIC7.04□□□□□ -1.28
Cux1P53564 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Cux1P53564 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Cux1P53564 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Cux1P53564 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Cux1P53564 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Cux1P53564 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cux1P53564 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Cux1P53564 AC108802.1-201ENSMUST00000219501 3142 ntBASIC7.03□□□□□ -1.28
Cux1P53564 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Cux1P53564 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms