Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm24917-201ENSMUST00000083935 104 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm22444-201ENSMUST00000093693 108 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Shmt1P50431 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Shmt1P50431 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.74□□□□□ -1.49
Shmt1P50431 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Shmt1P50431 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Gm12677-201ENSMUST00000118668 426 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm11708-201ENSMUST00000119530 832 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Shmt1P50431 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.74□□□□□ -1.49
Shmt1P50431 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Shmt1P50431 Gm2914-201ENSMUST00000186120 328 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm18181-201ENSMUST00000190670 736 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm38281-201ENSMUST00000192301 315 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm38279-201ENSMUST00000194067 1131 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Mir6516-201ENSMUST00000196236 110 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm43232-201ENSMUST00000201346 364 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.74□□□□□ -1.49
Shmt1P50431 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.74□□□□□ -1.49
Shmt1P50431 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC5.74□□□□□ -1.49
Shmt1P50431 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5.74□□□□□ -1.49
Shmt1P50431 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 AC112274.2-201ENSMUST00000218436 170 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.74□□□□□ -1.49
Shmt1P50431 Gm30738-201ENSMUST00000221346 502 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Shmt1P50431 Clec2j-201ENSMUST00000032517 515 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Shmt1P50431 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Shmt1P50431 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Shmt1P50431 Gm22287-201ENSMUST00000083197 107 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm23459-201ENSMUST00000083259 131 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Mir412-201ENSMUST00000083636 80 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Shmt1P50431 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shmt1P50431 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.74□□□□□ -1.49
Shmt1P50431 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Shmt1P50431 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Shmt1P50431 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Shmt1P50431 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Shmt1P50431 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Shmt1P50431 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Shmt1P50431 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Shmt1P50431 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm11845-201ENSMUST00000117886 327 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm13815-201ENSMUST00000119963 412 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm11420-201ENSMUST00000120047 402 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm15019-201ENSMUST00000120148 434 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm13484-201ENSMUST00000120738 412 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm13024-201ENSMUST00000121756 718 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm15038-201ENSMUST00000122144 296 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC5.73□□□□□ -1.49
Shmt1P50431 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Shmt1P50431 Gm7609-204ENSMUST00000161424 461 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm20519-201ENSMUST00000173684 359 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm18396-201ENSMUST00000177095 361 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.73□□□□□ -1.49
Shmt1P50431 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 221.5 ms