Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm29747-201ENSMUST00000194764 585 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm19219-201ENSMUST00000215863 724 ntBASIC4.72□□□□□ -1.65
HttP42859 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
HttP42859 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HttP42859 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HttP42859 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.72□□□□□ -1.65
HttP42859 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.72□□□□□ -1.65
HttP42859 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Gm37332-201ENSMUST00000195853 2844 ntBASIC4.72□□□□□ -1.65
HttP42859 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.72□□□□□ -1.65
HttP42859 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Gm12039-201ENSMUST00000118219 180 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm25843-201ENSMUST00000122582 314 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm25908-201ENSMUST00000157624 98 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm25861-201ENSMUST00000158251 109 ntBASIC4.72□□□□□ -1.65
HttP42859 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.72□□□□□ -1.65
HttP42859 Gm38098-201ENSMUST00000194115 241 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.72□□□□□ -1.65
HttP42859 Gm6929-201ENSMUST00000210930 468 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm4928-201ENSMUST00000219622 850 ntBASIC4.72□□□□□ -1.65
HttP42859 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HttP42859 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HttP42859 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HttP42859 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HttP42859 Mir673-201ENSMUST00000102361 91 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm14991-201ENSMUST00000119913 598 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm24627-201ENSMUST00000122764 138 ntBASIC4.72□□□□□ -1.65
HttP42859 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.72□□□□□ -1.65
HttP42859 Gm22160-201ENSMUST00000158405 328 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm9775-201ENSMUST00000189402 331 ntBASIC4.72□□□□□ -1.65
HttP42859 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.72□□□□□ -1.65
HttP42859 Gm29774-201ENSMUST00000219270 436 ntBASIC4.72□□□□□ -1.65
HttP42859 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
HttP42859 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
HttP42859 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.71□□□□□ -1.65
HttP42859 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.71□□□□□ -1.65
HttP42859 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
HttP42859 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.71□□□□□ -1.65
HttP42859 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HttP42859 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.71□□□□□ -1.66
HttP42859 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.71□□□□□ -1.66
HttP42859 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.71□□□□□ -1.66
HttP42859 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
HttP42859 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
HttP42859 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Gm37248-201ENSMUST00000193576 3174 ntBASIC4.71□□□□□ -1.66
HttP42859 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Gm5182-201ENSMUST00000217708 6092 ntBASIC4.71□□□□□ -1.66
HttP42859 Gm15745-201ENSMUST00000119807 115 ntBASIC4.71□□□□□ -1.66
HttP42859 Gm11200-201ENSMUST00000121698 448 ntBASIC4.71□□□□□ -1.66
HttP42859 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Gm24944-201ENSMUST00000158330 128 ntBASIC4.71□□□□□ -1.66
HttP42859 Gm22011-201ENSMUST00000158790 123 ntBASIC4.71□□□□□ -1.66
HttP42859 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.71□□□□□ -1.66
HttP42859 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HttP42859 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HttP42859 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
HttP42859 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HttP42859 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HttP42859 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC4.71□□□□□ -1.66
HttP42859 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HttP42859 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.71□□□□□ -1.66
HttP42859 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.71□□□□□ -1.66
HttP42859 AC113031.7-201ENSMUST00000228609 1928 ntBASIC4.7□□□□□ -1.66
HttP42859 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.7□□□□□ -1.66
HttP42859 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.7□□□□□ -1.66
HttP42859 Mir7118-201ENSMUST00000197760 61 ntBASIC4.7□□□□□ -1.66
HttP42859 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC4.7□□□□□ -1.66
HttP42859 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.7□□□□□ -1.66
HttP42859 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HttP42859 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HttP42859 Gm37621-201ENSMUST00000194716 5531 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms