Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cxcl12P40224 Gm25140-201ENSMUST00000083254 140 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Mir383-201ENSMUST00000083523 70 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cxcl12P40224 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.89□□□□□ -1.63
Cxcl12P40224 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cxcl12P40224 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Cxcl12P40224 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cxcl12P40224 Mir551b-201ENSMUST00000102165 98 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm11911-201ENSMUST00000117938 1023 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm11698-201ENSMUST00000117948 455 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm12039-201ENSMUST00000118219 180 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm15799-201ENSMUST00000120899 289 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm5924-201ENSMUST00000132554 871 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm24689-201ENSMUST00000157760 104 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm27896-201ENSMUST00000175162 317 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Mir713-201ENSMUST00000178651 108 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm4526-201ENSMUST00000186039 920 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm45539-201ENSMUST00000210313 428 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm18507-201ENSMUST00000218855 525 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm3213-201ENSMUST00000219296 441 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm3338-201ENSMUST00000220982 269 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cxcl12P40224 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cxcl12P40224 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cxcl12P40224 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cxcl12P40224 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.88□□□□□ -1.63
Cxcl12P40224 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm24403-201ENSMUST00000104616 130 ntBASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm14775-201ENSMUST00000122089 310 ntBASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cxcl12P40224 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm30280-201ENSMUST00000192214 262 ntBASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm38270-201ENSMUST00000192721 407 ntBASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm38011-201ENSMUST00000193312 279 ntBASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm42830-201ENSMUST00000196642 313 ntBASIC4.87□□□□□ -1.63
Cxcl12P40224 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm5338-201ENSMUST00000209530 639 ntBASIC4.87□□□□□ -1.63
Cxcl12P40224 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.87□□□□□ -1.63
Cxcl12P40224 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Cxcl12P40224 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.87□□□□□ -1.63
Cxcl12P40224 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.87□□□□□ -1.63
Cxcl12P40224 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cxcl12P40224 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Cxcl12P40224 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cxcl12P40224 Gm43485-201ENSMUST00000199292 1710 ntBASIC4.86□□□□□ -1.63
Cxcl12P40224 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cxcl12P40224 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cxcl12P40224 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cxcl12P40224 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms