Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm15560-201ENSMUST00000117107 643 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm11366-201ENSMUST00000119279 429 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm13213-201ENSMUST00000119668 474 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm12317-201ENSMUST00000122307 319 ntBASIC5.78□□□□□ -1.48
Traf1P39428 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.78□□□□□ -1.48
Traf1P39428 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Gm16107-201ENSMUST00000162523 862 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Traf1P39428 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Gm8214-201ENSMUST00000172123 351 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm9499-201ENSMUST00000180888 964 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.78□□□□□ -1.48
Traf1P39428 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Gm2950-201ENSMUST00000185530 520 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm28614-201ENSMUST00000186483 458 ntBASIC5.78□□□□□ -1.48
Traf1P39428 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm36986-201ENSMUST00000195320 353 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm18747-201ENSMUST00000198129 648 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm43894-201ENSMUST00000203274 688 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Traf1P39428 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Traf1P39428 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.78□□□□□ -1.48
Traf1P39428 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Traf1P39428 Gm22155-201ENSMUST00000083836 162 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Traf1P39428 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Traf1P39428 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Traf1P39428 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Traf1P39428 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Traf1P39428 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Traf1P39428 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.77□□□□□ -1.49
Traf1P39428 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Traf1P39428 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Gm15357-201ENSMUST00000119160 285 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm11822-201ENSMUST00000119177 415 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.77□□□□□ -1.49
Traf1P39428 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm24628-201ENSMUST00000122761 289 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm22600-201ENSMUST00000157598 269 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm16566-201ENSMUST00000160387 910 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm6673-201ENSMUST00000166114 700 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Traf1P39428 Gm27818-201ENSMUST00000184536 159 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Mir6398-201ENSMUST00000184541 102 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.77□□□□□ -1.49
Traf1P39428 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.77□□□□□ -1.49
Traf1P39428 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Traf1P39428 Gm44820-201ENSMUST00000207420 396 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.77□□□□□ -1.49
Traf1P39428 Gm2607-201ENSMUST00000212389 627 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Traf1P39428 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.77□□□□□ -1.49
Traf1P39428 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Traf1P39428 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Traf1P39428 Gm26330-201ENSMUST00000082817 104 ntBASIC5.77□□□□□ -1.49
Traf1P39428 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Traf1P39428 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Traf1P39428 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.77□□□□□ -1.49
Traf1P39428 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Traf1P39428 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Traf1P39428 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Traf1P39428 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Traf1P39428 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Traf1P39428 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Traf1P39428 Gm25096-201ENSMUST00000104043 129 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm25419-201ENSMUST00000104215 191 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm15779-201ENSMUST00000117470 412 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm15981-201ENSMUST00000119196 457 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm11510-201ENSMUST00000120278 347 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm3362-201ENSMUST00000148102 466 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm22312-201ENSMUST00000158005 130 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Gm5777-201ENSMUST00000177265 448 ntBASIC5.76□□□□□ -1.49
Traf1P39428 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms