Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.21□□□□□ -1.58
BdnfP21237 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
BdnfP21237 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.21□□□□□ -1.58
BdnfP21237 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.21□□□□□ -1.58
BdnfP21237 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.21□□□□□ -1.58
BdnfP21237 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
BdnfP21237 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BdnfP21237 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BdnfP21237 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BdnfP21237 Gm22043-201ENSMUST00000082993 158 ntBASIC5.21□□□□□ -1.58
BdnfP21237 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.21□□□□□ -1.58
BdnfP21237 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BdnfP21237 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BdnfP21237 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
BdnfP21237 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BdnfP21237 Gm6545-201ENSMUST00000217186 1786 ntBASIC5.21□□□□□ -1.58
BdnfP21237 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BdnfP21237 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BdnfP21237 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.21□□□□□ -1.58
BdnfP21237 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BdnfP21237 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BdnfP21237 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.21□□□□□ -1.58
BdnfP21237 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.21□□□□□ -1.58
BdnfP21237 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
BdnfP21237 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Gm22372-201ENSMUST00000104589 136 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
BdnfP21237 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Gm14985-201ENSMUST00000118693 786 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm14805-201ENSMUST00000120172 340 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm15390-201ENSMUST00000120323 738 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm14599-201ENSMUST00000120469 474 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm14925-201ENSMUST00000120611 438 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm8545-201ENSMUST00000120692 801 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm14237-201ENSMUST00000122080 430 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm13131-201ENSMUST00000122228 321 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.2□□□□□ -1.58
BdnfP21237 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC5.2□□□□□ -1.58
BdnfP21237 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
BdnfP21237 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.2□□□□□ -1.58
BdnfP21237 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Gm29524-201ENSMUST00000190819 699 ntBASIC5.2□□□□□ -1.58
BdnfP21237 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm38098-201ENSMUST00000194115 241 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.2□□□□□ -1.58
BdnfP21237 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.2□□□□□ -1.58
BdnfP21237 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.2□□□□□ -1.58
BdnfP21237 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.2□□□□□ -1.58
BdnfP21237 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.2□□□□□ -1.58
BdnfP21237 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.2□□□□□ -1.58
BdnfP21237 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Mir143-201ENSMUST00000083511 63 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
BdnfP21237 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
BdnfP21237 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
BdnfP21237 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
BdnfP21237 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.2□□□□□ -1.58
BdnfP21237 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
BdnfP21237 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.2□□□□□ -1.58
BdnfP21237 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BdnfP21237 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BdnfP21237 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.19□□□□□ -1.58
BdnfP21237 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BdnfP21237 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
BdnfP21237 Gm3623-201ENSMUST00000173643 2747 ntBASIC5.19□□□□□ -1.58
BdnfP21237 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
BdnfP21237 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.19□□□□□ -1.58
BdnfP21237 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
BdnfP21237 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
BdnfP21237 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
BdnfP21237 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BdnfP21237 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BdnfP21237 Gm24709-201ENSMUST00000104123 132 ntBASIC5.19□□□□□ -1.58
BdnfP21237 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.19□□□□□ -1.58
BdnfP21237 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
BdnfP21237 Gm14050-201ENSMUST00000117052 346 ntBASIC5.19□□□□□ -1.58
BdnfP21237 Gm13772-201ENSMUST00000118431 317 ntBASIC5.19□□□□□ -1.58
BdnfP21237 Gm13473-201ENSMUST00000119289 367 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms