Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.09□□□□□ -1.75
Cdx1P18111 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.09□□□□□ -1.75
Cdx1P18111 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cdx1P18111 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
Cdx1P18111 Gm44330-201ENSMUST00000200106 143 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 Gm44132-201ENSMUST00000205142 151 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Cdx1P18111 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.09□□□□□ -1.75
Cdx1P18111 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.09□□□□□ -1.75
Cdx1P18111 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.09□□□□□ -1.75
Cdx1P18111 AC160980.2-201ENSMUST00000225131 949 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Cdx1P18111 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Cdx1P18111 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Cdx1P18111 Gm24319-201ENSMUST00000083389 107 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 Gm23795-201ENSMUST00000084006 137 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 Gm7676-201ENSMUST00000084055 319 ntBASIC4.09□□□□□ -1.75
Cdx1P18111 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cdx1P18111 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Cdx1P18111 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Cdx1P18111 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Cdx1P18111 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Cdx1P18111 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.09□□□□□ -1.76
Cdx1P18111 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Cdx1P18111 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdx1P18111 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm24235-201ENSMUST00000104319 129 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm15741-201ENSMUST00000119401 754 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm14472-201ENSMUST00000119815 282 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm13259-201ENSMUST00000120792 456 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.08□□□□□ -1.76
Cdx1P18111 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm22895-201ENSMUST00000157508 308 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm23116-201ENSMUST00000158481 67 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.08□□□□□ -1.76
Cdx1P18111 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm8669-201ENSMUST00000183839 945 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm28429-201ENSMUST00000188521 363 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm37932-201ENSMUST00000192258 1167 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm36985-201ENSMUST00000195595 379 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm32453-201ENSMUST00000204183 456 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm19039-201ENSMUST00000204363 575 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC4.08□□□□□ -1.76
Cdx1P18111 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm6230-201ENSMUST00000208077 780 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.08□□□□□ -1.76
Cdx1P18111 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 AC164295.2-201ENSMUST00000228539 757 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdx1P18111 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cdx1P18111 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Cdx1P18111 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Cdx1P18111 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Cdx1P18111 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.08□□□□□ -1.76
Cdx1P18111 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.08□□□□□ -1.76
Cdx1P18111 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Cdx1P18111 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Cdx1P18111 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdx1P18111 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Cdx1P18111 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
Cdx1P18111 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdx1P18111 Gm24789-201ENSMUST00000104282 131 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Cdx1P18111 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Cdx1P18111 Mir1188-201ENSMUST00000116756 120 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm13681-201ENSMUST00000117925 210 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm8595-201ENSMUST00000118250 630 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm14871-201ENSMUST00000119056 194 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm11483-201ENSMUST00000119839 247 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm12808-201ENSMUST00000120597 404 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm14601-201ENSMUST00000120892 236 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm11677-201ENSMUST00000121349 977 ntBASIC4.07□□□□□ -1.76
Cdx1P18111 Gm13007-201ENSMUST00000121866 365 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms