Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.05□□□□□ -1.6
Lire1P11260 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Gm44330-201ENSMUST00000200106 143 ntBASIC5.05□□□□□ -1.6
Lire1P11260 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.05□□□□□ -1.6
Lire1P11260 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.05□□□□□ -1.6
Lire1P11260 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.05□□□□□ -1.6
Lire1P11260 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.05□□□□□ -1.6
Lire1P11260 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.05□□□□□ -1.6
Lire1P11260 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Lire1P11260 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Gm26064-201ENSMUST00000083381 109 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Lire1P11260 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Lire1P11260 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Lire1P11260 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.05□□□□□ -1.6
Lire1P11260 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Lire1P11260 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.04□□□□□ -1.6
Lire1P11260 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lire1P11260 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Lire1P11260 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Lire1P11260 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Lire1P11260 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lire1P11260 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lire1P11260 Gm25758-201ENSMUST00000103987 129 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm15766-201ENSMUST00000118025 813 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm11719-201ENSMUST00000119399 351 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm12074-201ENSMUST00000120189 219 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm12808-201ENSMUST00000120597 404 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm11404-201ENSMUST00000120872 494 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm6373-201ENSMUST00000121026 360 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm13743-201ENSMUST00000121486 724 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm22106-201ENSMUST00000122544 127 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.04□□□□□ -1.6
Lire1P11260 Gm24940-201ENSMUST00000158326 108 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm25603-201ENSMUST00000158361 105 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm15838-201ENSMUST00000161575 180 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Gm22993-201ENSMUST00000175423 254 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm23799-201ENSMUST00000175559 120 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm27039-201ENSMUST00000182438 962 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Gm28017-201ENSMUST00000183434 126 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Lire1P11260 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.04□□□□□ -1.6
Lire1P11260 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.04□□□□□ -1.6
Lire1P11260 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.04□□□□□ -1.6
Lire1P11260 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.04□□□□□ -1.6
Lire1P11260 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Lire1P11260 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.04□□□□□ -1.6
Lire1P11260 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.04□□□□□ -1.6
Lire1P11260 AC151902.1-201ENSMUST00000227800 375 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Lire1P11260 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.04□□□□□ -1.6
Lire1P11260 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Lire1P11260 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.04□□□□□ -1.6
Lire1P11260 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Lire1P11260 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Lire1P11260 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.04□□□□□ -1.6
Lire1P11260 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Lire1P11260 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Lire1P11260 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lire1P11260 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm14541-201ENSMUST00000118985 157 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm14861-201ENSMUST00000119451 455 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm16200-201ENSMUST00000120385 331 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm13007-201ENSMUST00000121866 365 ntBASIC5.03□□□□□ -1.6
Lire1P11260 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lire1P11260 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.03□□□□□ -1.6
Lire1P11260 Gm11197-201ENSMUST00000145158 839 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.03□□□□□ -1.6
Lire1P11260 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Lire1P11260 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lire1P11260 Gm8669-201ENSMUST00000183839 945 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm6075-201ENSMUST00000186816 486 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.03□□□□□ -1.6
Lire1P11260 Gm28500-201ENSMUST00000190286 151 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm37219-201ENSMUST00000192036 926 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms