Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC5.44□□□□□ -1.54
Col1a1P11087 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 Gm29793-201ENSMUST00000202874 460 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 Gm45458-201ENSMUST00000209900 522 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col1a1P11087 Gm25592-201ENSMUST00000082635 131 ntBASIC5.44□□□□□ -1.54
Col1a1P11087 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Col1a1P11087 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Col1a1P11087 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col1a1P11087 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col1a1P11087 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col1a1P11087 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.43□□□□□ -1.54
Col1a1P11087 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col1a1P11087 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col1a1P11087 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col1a1P11087 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col1a1P11087 Gm14107-201ENSMUST00000117774 330 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm15012-201ENSMUST00000119176 106 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.43□□□□□ -1.54
Col1a1P11087 Gm23638-201ENSMUST00000175073 126 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm23158-201ENSMUST00000175076 126 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm22907-201ENSMUST00000175198 126 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm22625-201ENSMUST00000175382 126 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm22875-201ENSMUST00000175449 126 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm25197-201ENSMUST00000175516 126 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm27857-201ENSMUST00000176930 126 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm26268-201ENSMUST00000177685 126 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm23681-201ENSMUST00000178821 126 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm38270-201ENSMUST00000192721 407 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col1a1P11087 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.43□□□□□ -1.54
Col1a1P11087 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.43□□□□□ -1.54
Col1a1P11087 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col1a1P11087 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col1a1P11087 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col1a1P11087 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.43□□□□□ -1.54
Col1a1P11087 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Col1a1P11087 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
Col1a1P11087 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.43□□□□□ -1.54
Col1a1P11087 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col1a1P11087 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col1a1P11087 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col1a1P11087 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col1a1P11087 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col1a1P11087 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Col1a1P11087 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col1a1P11087 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.42□□□□□ -1.54
Col1a1P11087 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Gm15038-201ENSMUST00000122144 296 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col1a1P11087 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col1a1P11087 Gm25386-201ENSMUST00000157814 288 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col1a1P11087 Gm18828-202ENSMUST00000181035 310 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Gm27940-201ENSMUST00000184449 98 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.42□□□□□ -1.54
Col1a1P11087 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Gm3912-203ENSMUST00000211024 367 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 AC134860.6-201ENSMUST00000226038 285 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col1a1P11087 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col1a1P11087 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.42□□□□□ -1.54
Col1a1P11087 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col1a1P11087 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col1a1P11087 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col1a1P11087 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.42□□□□□ -1.54
Col1a1P11087 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.42□□□□□ -1.54
Col1a1P11087 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col1a1P11087 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col1a1P11087 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col1a1P11087 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col1a1P11087 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col1a1P11087 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col1a1P11087 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col1a1P11087 Gm25169-201ENSMUST00000104190 129 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Snora64-201ENSMUST00000104521 134 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Gm13195-201ENSMUST00000117229 261 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col1a1P11087 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.41□□□□□ -1.54
Col1a1P11087 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col1a1P11087 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col1a1P11087 Gm46190-201ENSMUST00000219650 427 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Gm5374-202ENSMUST00000222910 314 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Col1a1P11087 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Gm10042-201ENSMUST00000079884 78 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.41□□□□□ -1.54
Col1a1P11087 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms