Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Chmp6P0C0A3 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Mir676-201ENSMUST00000102443 89 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm11409-201ENSMUST00000118621 403 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm11366-201ENSMUST00000119279 429 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm12222-201ENSMUST00000121368 260 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm25603-201ENSMUST00000158361 105 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm26828-201ENSMUST00000180640 172 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm8614-201ENSMUST00000182528 978 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm28975-201ENSMUST00000186412 686 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm29036-201ENSMUST00000189967 877 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm37682-201ENSMUST00000191776 522 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm6546-201ENSMUST00000192096 766 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm8891-201ENSMUST00000198546 832 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm43794-201ENSMUST00000200971 692 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm32536-201ENSMUST00000205209 445 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm8319-201ENSMUST00000205708 641 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm19936-201ENSMUST00000216414 838 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm29785-201ENSMUST00000217033 383 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Mir134-201ENSMUST00000083492 71 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Chmp6P0C0A3 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm15421-202ENSMUST00000118224 399 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm24217-201ENSMUST00000158260 133 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm16107-201ENSMUST00000162523 862 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm20674-201ENSMUST00000177452 369 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 V1rg10-201ENSMUST00000183378 937 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm6075-201ENSMUST00000186816 486 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm9443-201ENSMUST00000188406 816 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm37243-201ENSMUST00000193407 595 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm43524-201ENSMUST00000197278 298 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Chmp6P0C0A3 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm24117-201ENSMUST00000103973 133 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm13033-201ENSMUST00000117591 1057 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm14576-201ENSMUST00000118073 1111 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Gm14369-201ENSMUST00000121355 285 ntBASIC5.12□□□□□ -1.59
Chmp6P0C0A3 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms