Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col4a1P02463 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.54□□□□□ -1.52
Col4a1P02463 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col4a1P02463 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.54□□□□□ -1.52
Col4a1P02463 Gm13737-201ENSMUST00000119793 232 ntBASIC5.54□□□□□ -1.52
Col4a1P02463 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.54□□□□□ -1.52
Col4a1P02463 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.54□□□□□ -1.52
Col4a1P02463 Gm3191-201ENSMUST00000167139 346 ntBASIC5.54□□□□□ -1.52
Col4a1P02463 Gm43037-201ENSMUST00000196808 250 ntBASIC5.54□□□□□ -1.52
Col4a1P02463 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.54□□□□□ -1.52
Col4a1P02463 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col4a1P02463 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col4a1P02463 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Col4a1P02463 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col4a1P02463 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col4a1P02463 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Col4a1P02463 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col4a1P02463 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col4a1P02463 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col4a1P02463 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col4a1P02463 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col4a1P02463 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.54□□□□□ -1.52
Col4a1P02463 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col4a1P02463 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.54□□□□□ -1.52
Col4a1P02463 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Col4a1P02463 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Col4a1P02463 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Col4a1P02463 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Col4a1P02463 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.54□□□□□ -1.52
Col4a1P02463 Gm22269-201ENSMUST00000104002 130 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.53□□□□□ -1.52
Col4a1P02463 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.53□□□□□ -1.52
Col4a1P02463 Gm11394-201ENSMUST00000181421 517 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.53□□□□□ -1.52
Col4a1P02463 Mir129b-201ENSMUST00000197461 65 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm45727-201ENSMUST00000212886 572 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col4a1P02463 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Col4a1P02463 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.53□□□□□ -1.52
Col4a1P02463 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col4a1P02463 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.53□□□□□ -1.52
Col4a1P02463 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a1P02463 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a1P02463 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a1P02463 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Col4a1P02463 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a1P02463 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col4a1P02463 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Col4a1P02463 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a1P02463 Gm14539-201ENSMUST00000117527 174 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm14122-201ENSMUST00000122076 973 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a1P02463 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a1P02463 Gm24224-201ENSMUST00000158828 258 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm29031-201ENSMUST00000185316 614 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm29000-201ENSMUST00000185444 614 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm28204-201ENSMUST00000185934 614 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm28290-201ENSMUST00000186505 614 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm28161-201ENSMUST00000186669 614 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm28749-209ENSMUST00000189599 614 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm33163-201ENSMUST00000194504 614 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.53□□□□□ -1.52
Col4a1P02463 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a1P02463 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.53□□□□□ -1.52
Col4a1P02463 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Col4a1P02463 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.52□□□□□ -1.53
Col4a1P02463 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col4a1P02463 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col4a1P02463 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Col4a1P02463 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Col4a1P02463 Gm12332-201ENSMUST00000121397 922 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Gm25264-201ENSMUST00000158519 117 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.52□□□□□ -1.53
Col4a1P02463 Gm6650-201ENSMUST00000166710 614 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col4a1P02463 Gm18877-201ENSMUST00000207706 539 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a1P02463 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.52□□□□□ -1.53
Col4a1P02463 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
Col4a1P02463 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms