Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 Gm336-201ENSMUST00000186376 1480 ntBASIC5.39□□□□□ -1.55
Pcdh1F7BJK1 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm12939-201ENSMUST00000117303 165 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm11904-201ENSMUST00000120562 248 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm12396-201ENSMUST00000121600 306 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm14530-201ENSMUST00000122391 333 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm24875-201ENSMUST00000158888 104 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm27588-201ENSMUST00000185096 263 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm29335-201ENSMUST00000188361 459 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm17981-201ENSMUST00000191109 739 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm37243-201ENSMUST00000193407 595 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm42437-201ENSMUST00000197263 923 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm7890-201ENSMUST00000204877 601 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm45485-201ENSMUST00000211229 357 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm18113-201ENSMUST00000220630 303 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm9267-201ENSMUST00000222831 404 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm6104-201ENSMUST00000078030 603 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm29486-201ENSMUST00000088648 372 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Pcdh1F7BJK1 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm26289-201ENSMUST00000104169 131 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm8202-201ENSMUST00000117682 310 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm14116-201ENSMUST00000117733 805 ntBASIC5.37□□□□□ -1.55
Pcdh1F7BJK1 Gm6884-201ENSMUST00000119318 615 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms