Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC5.13□□□□□ -1.59
Scn3aA2ASI5 Gm28749-209ENSMUST00000189599 614 ntBASIC5.13□□□□□ -1.59
Scn3aA2ASI5 Gm8823-201ENSMUST00000193158 433 ntBASIC5.13□□□□□ -1.59
Scn3aA2ASI5 Gm33163-201ENSMUST00000194504 614 ntBASIC5.13□□□□□ -1.59
Scn3aA2ASI5 Gm17779-201ENSMUST00000213395 394 ntBASIC5.13□□□□□ -1.59
Scn3aA2ASI5 AC153936.1-201ENSMUST00000219874 395 ntBASIC5.13□□□□□ -1.59
Scn3aA2ASI5 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.13□□□□□ -1.59
Scn3aA2ASI5 AV026068-220ENSMUST00000224153 1147 ntBASIC5.13□□□□□ -1.59
Scn3aA2ASI5 AV026068-224ENSMUST00000224827 928 ntBASIC5.13□□□□□ -1.59
Scn3aA2ASI5 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn3aA2ASI5 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Scn3aA2ASI5 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn3aA2ASI5 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm22493-201ENSMUST00000104494 132 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm12884-201ENSMUST00000120371 325 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm23789-201ENSMUST00000122536 301 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Mir3104-201ENSMUST00000174911 63 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm20657-201ENSMUST00000177079 515 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm37501-201ENSMUST00000192830 691 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm43710-201ENSMUST00000199583 452 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn3aA2ASI5 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm23273-201ENSMUST00000104058 135 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm22395-201ENSMUST00000177427 96 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm37881-201ENSMUST00000193001 421 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm44234-201ENSMUST00000204246 900 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm45209-201ENSMUST00000207122 353 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm7807-201ENSMUST00000212475 578 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm19807-201ENSMUST00000173971 667 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Mir7074-201ENSMUST00000183884 63 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Mir6537-201ENSMUST00000184150 110 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm18011-201ENSMUST00000203717 565 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Gm5338-201ENSMUST00000209530 639 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Snord59a-201ENSMUST00000082844 74 ntBASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Scn3aA2ASI5 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Gm11761-201ENSMUST00000121392 445 ntBASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Gm20614-201ENSMUST00000177106 632 ntBASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Gm43036-201ENSMUST00000200594 373 ntBASIC5.1□□□□□ -1.59
Scn3aA2ASI5 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms