Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Rab26os-201ENSMUST00000176215 477 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm16378-201ENSMUST00000179168 342 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Mir7235-201ENSMUST00000183796 56 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm27541-201ENSMUST00000184078 122 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.38□□□□□ -1.71
CtcflA2APF3 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm9569-201ENSMUST00000187492 787 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.38□□□□□ -1.71
CtcflA2APF3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm43554-201ENSMUST00000199987 186 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.38□□□□□ -1.71
CtcflA2APF3 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm5418-201ENSMUST00000206932 528 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm44779-201ENSMUST00000206937 708 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CtcflA2APF3 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.38□□□□□ -1.71
CtcflA2APF3 AC126554.4-201ENSMUST00000221055 409 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm9269-201ENSMUST00000221661 578 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm25682-201ENSMUST00000083942 164 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.38□□□□□ -1.71
CtcflA2APF3 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CtcflA2APF3 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CtcflA2APF3 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcflA2APF3 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcflA2APF3 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm15490-201ENSMUST00000119894 387 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm12650-201ENSMUST00000121966 258 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm26028-201ENSMUST00000158660 294 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Mir3080-201ENSMUST00000175010 79 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CtcflA2APF3 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm18843-201ENSMUST00000194982 719 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm29755-201ENSMUST00000196976 948 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm44879-201ENSMUST00000207007 503 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.37□□□□□ -1.71
CtcflA2APF3 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CtcflA2APF3 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Snord21-201ENSMUST00000082519 94 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CtcflA2APF3 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CtcflA2APF3 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.37□□□□□ -1.71
CtcflA2APF3 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcflA2APF3 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CtcflA2APF3 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CtcflA2APF3 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CtcflA2APF3 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CtcflA2APF3 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcflA2APF3 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm23424-201ENSMUST00000103889 110 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm24230-201ENSMUST00000104313 129 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.36□□□□□ -1.71
CtcflA2APF3 Mir466j-201ENSMUST00000116876 122 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm11409-201ENSMUST00000118621 403 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm4342-201ENSMUST00000118982 367 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm13887-201ENSMUST00000119009 344 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm15803-201ENSMUST00000120118 394 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm6673-201ENSMUST00000166114 700 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CtcflA2APF3 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm27849-201ENSMUST00000183673 125 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm28429-201ENSMUST00000188521 363 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm10048-201ENSMUST00000194196 372 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CtcflA2APF3 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm42830-201ENSMUST00000196642 313 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm33952-201ENSMUST00000197795 408 ntBASIC4.36□□□□□ -1.71
CtcflA2APF3 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms