Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim39Q9ESN2 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim39Q9ESN2 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim39Q9ESN2 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.09□□□□□ -1.43
Trim39Q9ESN2 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.09□□□□□ -1.43
Trim39Q9ESN2 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.09□□□□□ -1.43
Trim39Q9ESN2 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim39Q9ESN2 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.44
Trim39Q9ESN2 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
Trim39Q9ESN2 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Trim39Q9ESN2 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Trim39Q9ESN2 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.09□□□□□ -1.44
Trim39Q9ESN2 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.09□□□□□ -1.44
Trim39Q9ESN2 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm44587-201ENSMUST00000207399 1685 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm13331-201ENSMUST00000117500 448 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm24176-201ENSMUST00000158928 121 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm6061-201ENSMUST00000175860 492 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm22584-201ENSMUST00000177935 92 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm27507-201ENSMUST00000184199 93 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Mir7005-201ENSMUST00000185089 69 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm28974-201ENSMUST00000187893 231 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Nras-ps2-201ENSMUST00000195269 178 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm36448-201ENSMUST00000199916 438 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm45596-201ENSMUST00000209279 434 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm9685-201ENSMUST00000211275 538 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm18618-201ENSMUST00000222211 473 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.08□□□□□ -1.44
Trim39Q9ESN2 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Trim39Q9ESN2 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms