Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm26347-201ENSMUST00000157526 131 ntBASIC4.62□□□□□ -1.67
Lima1Q9ERG0 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm27036-201ENSMUST00000182465 980 ntBASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm19936-201ENSMUST00000216414 838 ntBASIC4.62□□□□□ -1.67
Lima1Q9ERG0 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Lima1Q9ERG0 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm25919-201ENSMUST00000104271 132 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm15779-201ENSMUST00000117470 412 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm9435-201ENSMUST00000120379 877 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm11584-201ENSMUST00000120636 325 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm12005-201ENSMUST00000121451 379 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm16114-201ENSMUST00000161930 300 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm26318-201ENSMUST00000176507 96 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm17981-201ENSMUST00000191109 739 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm10292-202ENSMUST00000193165 585 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm3148-201ENSMUST00000203594 612 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm44795-201ENSMUST00000205496 319 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lima1Q9ERG0 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm13867-201ENSMUST00000120844 395 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm24664-201ENSMUST00000158939 100 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms