Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.54□□□□□ -1.68
Cdc40Q9DC48 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm8202-201ENSMUST00000117682 310 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm7312-201ENSMUST00000118798 469 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm12820-201ENSMUST00000119233 342 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm11866-201ENSMUST00000120209 335 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm13162-201ENSMUST00000121481 454 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm15905-201ENSMUST00000137042 298 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm24944-201ENSMUST00000158330 128 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm4134-201ENSMUST00000173244 563 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm18828-202ENSMUST00000181035 310 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Mir7028-201ENSMUST00000185016 64 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm36986-201ENSMUST00000195320 353 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm42663-201ENSMUST00000199883 351 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm19617-201ENSMUST00000202977 308 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm4714-201ENSMUST00000203395 279 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.53□□□□□ -1.68
Cdc40Q9DC48 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Snord65-201ENSMUST00000104269 72 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm22676-201ENSMUST00000116972 129 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm12073-201ENSMUST00000117382 524 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm14539-201ENSMUST00000117527 174 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm12717-201ENSMUST00000118427 983 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm24628-201ENSMUST00000122761 289 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm26490-201ENSMUST00000157879 140 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm23318-201ENSMUST00000158000 108 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm17081-201ENSMUST00000167363 478 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm23925-202ENSMUST00000188429 132 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm37996-201ENSMUST00000191859 367 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm5045-201ENSMUST00000027054 810 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm24919-201ENSMUST00000083020 106 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.52□□□□□ -1.69
Cdc40Q9DC48 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Cdc40Q9DC48 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms