Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Alx1Q8C8B0 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Alx1Q8C8B0 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Alx1Q8C8B0 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Alx1Q8C8B0 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.42□□□□□ -1.54
Alx1Q8C8B0 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Alx1Q8C8B0 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Alx1Q8C8B0 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm14500-201ENSMUST00000121647 113 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm38221-201ENSMUST00000195146 365 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm18791-201ENSMUST00000204611 726 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm45845-201ENSMUST00000207326 582 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm45610-201ENSMUST00000209227 784 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.41□□□□□ -1.54
Alx1Q8C8B0 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm23193-201ENSMUST00000102427 82 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm11914-201ENSMUST00000117094 507 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm15057-201ENSMUST00000121516 534 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm23964-201ENSMUST00000157966 107 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Mir6410-201ENSMUST00000184204 104 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Mir6986-201ENSMUST00000184483 58 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm28385-201ENSMUST00000185671 292 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm23925-202ENSMUST00000188429 132 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm17956-201ENSMUST00000199931 838 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Gm44952-201ENSMUST00000204443 433 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Alx1Q8C8B0 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Alx1Q8C8B0 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.4□□□□□ -1.55
Alx1Q8C8B0 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.4□□□□□ -1.55
Alx1Q8C8B0 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.4□□□□□ -1.55
Alx1Q8C8B0 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm18128-201ENSMUST00000172625 511 ntBASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm25019-201ENSMUST00000179732 110 ntBASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm42581-201ENSMUST00000201774 966 ntBASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm45228-201ENSMUST00000206585 352 ntBASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.39□□□□□ -1.55
Alx1Q8C8B0 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms